Reference Gene Name: Phfumi.CG.MTP2014.S2006.g04393 Ensembl
Reference Species : Phfumi
Root Species : 34_Deuterostomia (~10 million years) 		34_Deuterostomia Link Wikipedia to Phfumi Link Ensembl
×2 ÷2 Center the view on the reference gene Shift 1 gene on the left Shift 5 genes on the left Shift 1 gene on the right Shift 5 genes on the right Zoom out Show 1 less gene on each side Show 1 more gene on each side Show half the number of genes on each side Show twice more genes on each side Zoom in
Schematic scale
Genomic scale
dN/dS Ratio
Protein Similarity
CNE Track
34_Deuterostomia duplication node (click to collapse) 34_Deuterostomia (~10 My ago) Click to show this node (34_Deuterostomia) 34_Deuterostomia duplication node (click to collapse) Click to show this node (34_Deuterostomia) 34_Deuterostomia duplication node (click to collapse) Click to show this node (34_Deuterostomia) 34_Deuterostomia speciation node (click to collapse) Click to show this node (30_Chordata) 30_Chordata speciation node (click to collapse) Click to hide this line (28) 28 speciation node (click to collapse) 28 (~10 My ago) Click to hide this line (16_Ascidiacea) 16_Ascidiacea speciation node (click to collapse) 16_Ascidiacea (~10 My ago) Click to hide this line (15_Phlebobranchia) 15_Phlebobranchia speciation node (click to collapse) 15_Phlebobranchia (~10 My ago) Click to hide this line (14_Phallusia) 14_Phallusia speciation node (click to collapse) 14_Phallusia (~10 My ago) - block_948 Click to hide this line (Phfumi) Phfumi terminal node Phfumi - Chr:S2006 Click to hide this line (Phmamm) Phmamm terminal node Phmamm - Chr:S272 Phmamm.CG.MTP2014.S272.g06481 Phmamm.CG.MTP2014.S272.g06482 Phmamm.CG.MTP2014.S272.g06483 Phmamm.CG.MTP2014.S272.g06484 Phmamm.CG.MTP2014.S272.g06485 Phmamm.CG.MTP2014.S272.g06486 Phmamm.CG.MTP2014.S272.g06487 Phmamm.CG.MTP2014.S272.g06488 Phmamm.CG.MTP2014.S272.g06489 Phmamm.CG.MTP2014.S272.g06490 Phmamm.CG.MTP2014.S272.g06491 Phmamm.CG.MTP2014.S272.g06492 Phmamm.CG.MTP2014.S272.g06495 Phmamm.CG.MTP2014.S272.g06496 Phmamm.CG.MTP2014.S272.g06497 Click to hide this line (11_Ciona) 11_Ciona speciation node (click to collapse) 11_Ciona (~10 My ago) - block_1110 Fam002414.F Click to hide this line (Cisavi) Cisavi terminal node Cisavi - Chr:reftig_30 Cisavi.CG.ENS81.R30.1077292-1086354 (ENSCSAVG00000002848) Cisavi.CG.ENS81.R30.1092212-1095058 (ENSCSAVG00000002883) Cisavi.CG.ENS81.R30.1097535-1099316 (ENSCSAVG00000002885) Cisavi.CG.ENS81.R30.1099603-1101350 (ENSCSAVG00000002887) Cisavi.CG.ENS81.R30.1103177-1107951 (ENSCSAVG00000002889) Cisavi.CG.ENS81.R30.1118946-1130470 (ENSCSAVG00000002893) Cisavi.CG.ENS81.R30.1154497-1156052 (ENSCSAVG00000003058) Cisavi.CG.ENS81.R30.1156757-1168095 (ENSCSAVG00000003062) Cisavi.CG.ENS81.R30.1195100-1203859 (ENSCSAVG00000003075) Cisavi.CG.ENS81.R30.1206968-1211835 (ENSCSAVG00000003080) Cisavi.CG.ENS81.R30.1213580-1220839 (ENSCSAVG00000003085) Cisavi.CG.ENS81.R30.1233315-1238006 (ENSCSAVG00000003170) Cisavi.CG.ENS81.R30.1254421-1255980 (ENSCSAVG00000003174) Cisavi.CG.ENS81.R30.1274675-1277827 (ENSCSAVG00000003179) Cisavi.CG.ENS81.R30.1299582-1300100 (ENSCSAVG00000003184) Cisavi.CG.ENS81.R30.1340180-1345633 (ENSCSAVG00000003196) Cisavi.CG.ENS81.R30.1353394-1381860 (ENSCSAVG00000003383) Cisavi.CG.ENS81.R30.1384092-1387225 (ENSCSAVG00000003471) Cisavi.CG.ENS81.R30.1387173-1392725 (ENSCSAVG00000003474) Cisavi.CG.ENS81.R30.1395617-1396097 (ENSCSAVG00000003479) Cisavi.CG.ENS81.R30.1395646-1396097 (ENSCSAVG00000003480) Cisavi.CG.ENS81.R30.1413819-1425250 (ENSCSAVG00000003482) Cisavi.CG.ENS81.R30.1443228-1444322 (ENSCSAVG00000003483) Cisavi.CG.ENS81.R30.1455785-1458712 (ENSCSAVG00000003489) Cisavi.CG.ENS81.R30.1473200-1475450 (ENSCSAVG00000003491) Cisavi.CG.ENS81.R30.1492820-1496203 (ENSCSAVG00000003493) Cisavi.CG.ENS81.R30.1500923-1504750 (ENSCSAVG00000003496) Cisavi.CG.ENS81.R30.1516923-1523336 (ENSCSAVG00000003498) Cisavi.CG.ENS81.R30.1524457-1533920 (ENSCSAVG00000003522) Cisavi.CG.ENS81.R30.1536279-1540171 (ENSCSAVG00000003525) Click to hide this line (Cirobu) Cirobu terminal node Cirobu - Chr:KhL139 KH2012:KH.L139.24 KH2012:KH.L139.4 KH2012:KH.L139.1 KH2012:KH.L139.20 KH2012:KH.L139.16 KH2012:KH.L139.11 KH2012:KH.L139.26 KH2012:KH.L139.15 KH2012:KH.L139.25 KH2012:KH.L139.9 KH2012:KH.L139.14 KH2012:KH.L139.2 KH2012:KH.L139.7 KH2012:KH.L139.6 KH2012:KH.L139.22 KH2012:KH.L139.23 KH2012:KH.L139.8 KH2012:KH.L139.3 KH2012:KH.L139.21 KH2012:KH.L139.19 KH2012:KH.L139.13 KH2012:KH.L139.18 KH2012:KH.L139.10 KH2012:KH.L139.12 Click to hide this line (8_Stolidobranchia) 8_Stolidobranchia speciation node (click to collapse) 8_Stolidobranchia (~10 My ago) - block_168 Fam001704.A.b Click to hide this line (7) 7 speciation node (click to collapse) 7 (~10 My ago) - block_146 Fam001704.A.b Click to hide this line (Boschl) Boschl terminal node Boschl - Chr:chr5 Boschl.CG.Botznik2013.chr5.g22452 Boschl.CG.Botznik2013.chr5.g22533 Boschl.CG.Botznik2013.chr5.g22540 Boschl.CG.Botznik2013.chr5.g22542 Boschl.CG.Botznik2013.chr5.g22561 Boschl.CG.Botznik2013.chr5.g22563 Boschl.CG.Botznik2013.chr5.g22567 Boschl.CG.Botznik2013.chr5.g22590 Boschl.CG.Botznik2013.chr5.g22692 Boschl.CG.Botznik2013.chr5.g22720 Boschl.CG.Botznik2013.chr5.g22737 Boschl.CG.Botznik2013.chr5.g22790 Boschl.CG.Botznik2013.chr5.g22815 Boschl.CG.Botznik2013.chr5.g22816 Boschl.CG.Botznik2013.chr5.g22939 Boschl.CG.Botznik2013.chr5.g22941 Boschl.CG.Botznik2013.chr5.g22970 Boschl.CG.Botznik2013.chr5.g23009 Boschl.CG.Botznik2013.chr5.g23011 Boschl.CG.Botznik2013.chr5.g23152 Boschl.CG.Botznik2013.chr5.g23153 Boschl.CG.Botznik2013.chr5.g23269 Boschl.CG.Botznik2013.chr5.g23388 Boschl.CG.Botznik2013.chr5.g23389 Boschl.CG.Botznik2013.chr5.g23418 Boschl.CG.Botznik2013.chr5.g23455 Boschl.CG.Botznik2013.chr5.g23494 Boschl.CG.Botznik2013.chr5.g23503 Boschl.CG.Botznik2013.chr5.g23521 Boschl.CG.Botznik2013.chr5.g23620 Click to hide this line (6_Halocynthia) 6_Halocynthia speciation node (click to collapse) 6_Halocynthia (~10 My ago) - block_339 Fam001305.B.b.a.d Fam001704.A.b Fam008854 Fam002635.A.b.b.b Click to hide this line (Haaura) Haaura terminal node Haaura - Chr:S506 Haaura.CG.MTP2014.S506.g05452 Haaura.CG.MTP2014.S506.g05453 Haaura.CG.MTP2014.S506.g05454 Haaura.CG.MTP2014.S506.g05456 Haaura.CG.MTP2014.S506.g05457 Click to hide this line (Harore) Harore terminal node Harore - Chr:S86 Harore.CG.MTP2014.S86.g05213 Harore.CG.MTP2014.S86.g08100 Harore.CG.MTP2014.S86.g10899 Harore.CG.MTP2014.S86.g11577 Harore.CG.MTP2014.S86.g16077 Harore.CG.MTP2014.S86.g06985 Harore.CG.MTP2014.S86.g15366 Harore.CG.MTP2014.S86.g03063 Harore.CG.MTP2014.S86.g08766 Harore.CG.MTP2014.S86.g05102 Harore.CG.MTP2014.S86.g14947 Harore.CG.MTP2014.S86.g15367 Harore.CG.MTP2014.S86.g12735 Harore.CG.MTP2014.S86.g09432 Harore.CG.MTP2014.S86.g13524 Harore.CG.MTP2014.S86.g09197 Harore.CG.MTP2014.S86.g04517 Harore.CG.MTP2014.S86.g06802 Harore.CG.MTP2014.S86.g13891 Harore.CG.MTP2014.S86.g10481 Click to hide this line (2_Molgula) 2_Molgula speciation node (click to collapse) 2_Molgula (~10 My ago) - block_336 Fam009805 Click to hide this line (Moocci) Moocci terminal node Moocci - Chr:S595707 Moocci.CG.ELv1_2.S595707.g24276 Moocci.CG.ELv1_2.S595707.g24277 Moocci.CG.ELv1_2.S595707.g24278 Moocci.CG.ELv1_2.S595707.g24279 Moocci.CG.ELv1_2.S595707.g24280 Moocci.CG.ELv1_2.S595707.g24281 Moocci.CG.ELv1_2.S595707.g24282 Moocci.CG.ELv1_2.S595707.g24284 Click to hide this line (Moocul) Moocul terminal node Moocul - Chr:S4192 Moocul.CG.ELv1_2.S4192.g00103 Moocul.CG.ELv1_2.S4192.g00104 Moocul.CG.ELv1_2.S4192.g00106 Moocul.CG.ELv1_2.S4192.g00107 Moocul.CG.ELv1_2.S4192.g00108 Moocul.CG.ELv1_2.S4192.g00109 Moocul.CG.ELv1_2.S4192.g00110 Moocul.CG.ELv1_2.S4192.g00111 Moocul.CG.ELv1_2.S4192.g00112 Moocul.CG.ELv1_2.S4192.g00113 Click to show this node (26_Sarcopterygii) 26_Sarcopterygii duplication node (click to collapse) Click to hide this line (26_Sarcopterygii) 26_Sarcopterygii speciation node (click to collapse) 26_Sarcopterygii (~10 My ago) Click to show this node (25_Amniota) 25_Amniota speciation node (click to collapse) Click to hide this line (24_Euarchontoglires) 24_Euarchontoglires speciation node (click to collapse) 24_Euarchontoglires (~10 My ago) - block_90 Fam001960.H.b.a Fam006183.d.b.a.b Fam001694.A.b.a Fam005268.b.a Fam004673.A.b Fam005216.b.a.b Fam010002.a.a Fam001865.C.b.b.b Fam001963.B.b Fam003873.A.a.b Fam008346 Fam002337.A.a.b Fam003998.a Fam005189.b.a.b Fam002359.C.c Fam005923.b Fam005185.b.a Click to hide this line (Mmus) Mmus terminal node Mmus - Chr:X ENSMUSG00000101381 ENSMUSG00000078218 ENSMUSG00000094307 ENSMUSG00000094596 ENSMUSG00000094273 ENSMUSG00000078213 ENSMUSG00000094860 ENSMUSG00000044597 ENSMUSG00000095814 ENSMUSG00000073295 ENSMUSG00000073294 ENSMUSG00000073293 ENSMUSG00000068270 ENSMUSG00000062393 ENSMUSG00000050089 ENSMUSG00000004317 ENSMUSG00000046269 ENSMUSG00000039556 ENSMUSG00000039521 ENSMUSG00000031143 ENSMUSG00000031142 ENSMUSG00000031144 ENSMUSG00000031145 ENSMUSG00000031146 ENSMUSG00000031147 ENSMUSG00000031148 ENSMUSG00000109493 ENSMUSG00000039382 ENSMUSG00000031149 Click to hide this line (Hsap) Hsap terminal node Hsap - Chr:X ENSG00000275113 ENSG00000236737 ENSG00000237671 ENSG00000227488 ENSG00000216649 ENSG00000236362 ENSG00000215269 ENSG00000224902 ENSG00000189064 ENSG00000205777 ENSG00000068985 ENSG00000101951 ENSG00000273820 ENSG00000171365 ENSG00000147081 ENSG00000274588 ENSG00000158352 ENSG00000122824 ENSG00000187690 ENSG00000196368 ENSG00000224109 ENSG00000283093 ENSG00000223591 ENSG00000189369 ENSG00000179222 ENSG00000187243 ENSG00000154545 ENSG00000155622 ENSG00000204379 Click to hide this line (Lcha) Lcha terminal node Lcha - Chr:JH126981.1 ENSLACG00000007410 ENSLACG00000007636 ENSLACG00000007757 ENSLACG00000007826 ENSLACG00000008031 ENSLACG00000008813 ENSLACG00000009253 ENSLACG00000009874 ENSLACG00000010494 ENSLACG00000010774 ENSLACG00000011107 ENSLACG00000011205 ENSLACG00000011283 ENSLACG00000011485 ENSLACG00000012071 ENSLACG00000012482 ENSLACG00000012702 ENSLACG00000013012 ENSLACG00000013289 ENSLACG00000014264 ENSLACG00000014482 ENSLACG00000014608 ENSLACG00000014742 ENSLACG00000014825 ENSLACG00000015164 ENSLACG00000015262 ENSLACG00000015463 ENSLACG00000015489 ENSLACG00000022440 ENSLACG00000015848 Click to show this node (26_Sarcopterygii) 26_Sarcopterygii duplication node (click to collapse) Click to show this node (26_Sarcopterygii) 26_Sarcopterygii speciation node (click to collapse) Click to show this node (25_Amniota) 25_Amniota speciation node (click to collapse) Click to show this node (21_Archelosauria) 21_Archelosauria speciation node (click to collapse) Click to hide this line (Ggal) Ggal terminal node Ggal - Chr:4 ENSGALG00000024039 ENSGALG00000003962 ENSGALG00000003951 ENSGALG00000025935 ENSGALG00000003920 ENSGALG00000003881 ENSGALG00000003878 ENSGALG00000028506 ENSGALG00000026388 ENSGALG00000003860 ENSGALG00000027069 ENSGALG00000028084 ENSGALG00000024029 ENSGALG00000004730 ENSGALG00000004734 ENSGALG00000003841 ENSGALG00000027208 ENSGALG00000004801 ENSGALG00000004825 ENSGALG00000004831 ENSGALG00000004832 ENSGALG00000004856 ENSGALG00000004870 ENSGALG00000028975 ENSGALG00000004908 ENSGALG00000004918 ENSGALG00000000112 ENSGALG00000004936 ENSGALG00000004948 Click to show this node (26_Sarcopterygii) 26_Sarcopterygii speciation node (click to collapse) Click to show this node (Lcha) Lcha duplication node (click to collapse) Click to hide this line (Lcha) Lcha terminal node Lcha - Chr:JH126703.1 ENSLACG00000001667 ENSLACG00000002000 ENSLACG00000002634 ENSLACG00000003006 ENSLACG00000006907 ENSLACG00000009945 ENSLACG00000010897 ENSLACG00000011228 ENSLACG00000011351 ENSLACG00000011782 ENSLACG00000012971 ENSLACG00000013906 ENSLACG00000014222 ENSLACG00000014541 ENSLACG00000014968 ENSLACG00000016011 ENSLACG00000016067 ENSLACG00000016135 ENSLACG00000016296 ENSLACG00000016686 ENSLACG00000017410 ENSLACG00000017436 ENSLACG00000017557 ENSLACG00000017592 ENSLACG00000017624 ENSLACG00000017675 ENSLACG00000017681 Click to hide this line (34_Deuterostomia) 34_Deuterostomia speciation node (click to collapse) 34_Deuterostomia (~10 My ago) Click to hide this line (33) 33 speciation node (click to collapse) 33 (~10 My ago) Click to hide this line (Skow) Skow terminal node Skow - scaffold_541 Sakowv30029274m.g Sakowv30029241m.g Sakowv30029253m.g Sakowv30029266m.g Sakowv30029255m.g Sakowv30029243m.g Sakowv30029267m.g Sakowv30029237m.g Sakowv30029263m.g Sakowv30029260m.g Sakowv30029254m.g Sakowv30029279m.g Sakowv30029238m.g Sakowv30029275m.g Sakowv30029257m.g Sakowv30029268m.g Click to hide this line (Spur) Spur terminal node Spur - Chr:Scaffold700 SPU_014960 SPU_002146 SPU_010074 SPU_018265 SPU_010073 SPU_006893 SPU_026345 SPU_019115 SPU_019114 Click to show this node (30_Chordata) 30_Chordata speciation node (click to collapse) Click to hide this line (Bbel) Bbel terminal node Bbel - scaffold78 271930R 271950R 271960F 271970R 271980F 271990F 272000R 272010R 272020F 272030R 272040F 272050R 272060F 272070R 272080R 272090R Click to show this node (34_Deuterostomia) 34_Deuterostomia duplication node (click to collapse) Click to show this node (34_Deuterostomia) 34_Deuterostomia speciation node (click to collapse) Click to show this node (30_Chordata) 30_Chordata speciation node (click to collapse) Click to show this node (28) 28 speciation node (click to collapse) Click to show this node (16_Ascidiacea) 16_Ascidiacea duplication node (click to collapse) Click to show this node (16_Ascidiacea) 16_Ascidiacea speciation node (click to collapse) Click to show this node (8_Stolidobranchia) 8_Stolidobranchia speciation node (click to collapse) Click to hide this line (2_Molgula) 2_Molgula speciation node (click to collapse) 2_Molgula (~10 My ago) Click to hide this line (Moocci) Moocci terminal node Moocci - Chr:S194844 Moocci.CG.ELv1_2.S194844.g03955 Click to hide this line (Moocul) Moocul terminal node Moocul - Chr:S114545 Moocul.CG.ELv1_2.S114545.g13496 Moocul.CG.ELv1_2.S114545.g13497 Moocul.CG.ELv1_2.S114545.g13498 Moocul.CG.ELv1_2.S114545.g13499 Moocul.CG.ELv1_2.S114545.g13500 Moocul.CG.ELv1_2.S114545.g13502 Click to hide this line (16_Ascidiacea) 16_Ascidiacea speciation node (click to collapse) 16_Ascidiacea (~10 My ago) Click to show this node (8_Stolidobranchia) 8_Stolidobranchia speciation node (click to collapse) Click to hide this line (7) 7 speciation node (click to collapse) 7 (~10 My ago) Click to hide this line (6_Halocynthia) 6_Halocynthia speciation node (click to collapse) 6_Halocynthia (~10 My ago) - block_10 Fam005095.b Fam001768.F Fam002334.U.b.b.a.b.a.b.b.b Fam007153.a.b.b.b.b.b Fam004798.B.c Fam001728.H Fam001065 Fam002436.A Fam007644.a Fam001768.G.a.a Fam005150.a.b.b Fam005695.b.a Fam002336.VD Fam002956.A.c.a Fam002238.B.b Fam003525.b Click to hide this line (Harore) Harore terminal node Harore - Chr:S4 Harore.CG.MTP2014.S4.g13425 Harore.CG.MTP2014.S4.g00831 Harore.CG.MTP2014.S4.g11169 Harore.CG.MTP2014.S4.g01100 Harore.CG.MTP2014.S4.g14397 Harore.CG.MTP2014.S4.g12020 Harore.CG.MTP2014.S4.g10428 Harore.CG.MTP2014.S4.g12446 Harore.CG.MTP2014.S4.g14880 Harore.CG.MTP2014.S4.g03337 Harore.CG.MTP2014.S4.g11014 Harore.CG.MTP2014.S4.g07866 Harore.CG.MTP2014.S4.g09597 Harore.CG.MTP2014.S4.g00028 Harore.CG.MTP2014.S4.g04097 Harore.CG.MTP2014.S4.g10099 Harore.CG.MTP2014.S4.g00870 Harore.CG.MTP2014.S4.g11984 Harore.CG.MTP2014.S4.g12120 Harore.CG.MTP2014.S4.g14263 Harore.CG.MTP2014.S4.g14051 Harore.CG.MTP2014.S4.g12455 Harore.CG.MTP2014.S4.g03413 Harore.CG.MTP2014.S4.g12505 Harore.CG.MTP2014.S4.g01401 Harore.CG.MTP2014.S4.g03810 Harore.CG.MTP2014.S4.g15718 Harore.CG.MTP2014.S4.g07814 Harore.CG.MTP2014.S4.g00403 Click to hide this line (Haaura) Haaura terminal node Haaura - Chr:S5 Haaura.CG.MTP2014.S5.g00162 Haaura.CG.MTP2014.S5.g00165 Haaura.CG.MTP2014.S5.g00166 Haaura.CG.MTP2014.S5.g00167 Haaura.CG.MTP2014.S5.g00168 Haaura.CG.MTP2014.S5.g00169 Haaura.CG.MTP2014.S5.g00170 Haaura.CG.MTP2014.S5.g00171 Haaura.CG.MTP2014.S5.g00172 Haaura.CG.MTP2014.S5.g00173 Haaura.CG.MTP2014.S5.g00174 Haaura.CG.MTP2014.S5.g00175 Haaura.CG.MTP2014.S5.g00176 Haaura.CG.MTP2014.S5.g00177 Haaura.CG.MTP2014.S5.g00178 Haaura.CG.MTP2014.S5.g00179 Click to hide this line (Boschl) Boschl terminal node Boschl - Chr:chr7 Boschl.CG.Botznik2013.chr7.g66403 Boschl.CG.Botznik2013.chr7.g66404 Boschl.CG.Botznik2013.chr7.g66405 Boschl.CG.Botznik2013.chr7.g68733 Boschl.CG.Botznik2013.chr7.g68784 Boschl.CG.Botznik2013.chr7.g68864 Boschl.CG.Botznik2013.chr7.g69000 Boschl.CG.Botznik2013.chr7.g69015 Boschl.CG.Botznik2013.chr7.g69018 Boschl.CG.Botznik2013.chr7.g69099 Boschl.CG.Botznik2013.chr7.g69134 Boschl.CG.Botznik2013.chr7.g69135 Boschl.CG.Botznik2013.chr7.g69140 Boschl.CG.Botznik2013.chr7.g66169 Boschl.CG.Botznik2013.chr7.g66170 Boschl.CG.Botznik2013.chr7.g64253 Boschl.CG.Botznik2013.chr7.g64279 Boschl.CG.Botznik2013.chr7.g64291 Boschl.CG.Botznik2013.chr7.g64292 Boschl.CG.Botznik2013.chr7.g64310 Boschl.CG.Botznik2013.chr7.g64356 Boschl.CG.Botznik2013.chr7.g64357 Boschl.CG.Botznik2013.chr7.g64358 Boschl.CG.Botznik2013.chr7.g64621 Boschl.CG.Botznik2013.chr7.g64629 Boschl.CG.Botznik2013.chr7.g64634 Boschl.CG.Botznik2013.chr7.g64697 Boschl.CG.Botznik2013.chr7.g64698 Boschl.CG.Botznik2013.chr7.g63843 Boschl.CG.Botznik2013.chr7.g64875 Click to hide this line (15_Phlebobranchia) 15_Phlebobranchia speciation node (click to collapse) 15_Phlebobranchia (~10 My ago) Click to hide this line (11_Ciona) 11_Ciona speciation node (click to collapse) 11_Ciona (~10 My ago) - block_90 Fam001717.E Fam002548.H Fam006297 Fam004840.A Fam002228.V.a.c Fam003995 Fam003378 Fam004785.a Click to hide this line (Cirobu) Cirobu terminal node Cirobu - Chr:KhC4 KH2012:KH.C4.347 KH2012:KH.C4.306 KH2012:KH.C4.201 KH2012:KH.C4.556 KH2012:KH.C4.295 KH2012:KH.C4.156 KH2012:KH.C4.131 KH2012:KH.C4.792 KH2012:KH.C4.806 KH2012:KH.C4.298 KH2012:KH.C4.543 KH2012:KH.C4.17 KH2012:KH.C4.447 KH2012:KH.C4.657 KH2012:KH.C4.589 KH2012:KH.C4.174 KH2012:KH.C4.399 KH2012:KH.C4.164 KH2012:KH.C4.484 KH2012:KH.C4.787 KH2012:KH.C4.738 KH2012:KH.C4.534 KH2012:KH.C4.750 KH2012:KH.C4.595 KH2012:KH.C4.334 KH2012:KH.C4.705 KH2012:KH.C4.152 KH2012:KH.C4.527 KH2012:KH.C4.407 Click to hide this line (Cisavi) Cisavi terminal node Cisavi - Chr:reftig_41 Cisavi.CG.ENS81.R41.2579681-2583138 (ENSCSAVG00000008719) Cisavi.CG.ENS81.R41.2606827-2608520 (ENSCSAVG00000008736) Cisavi.CG.ENS81.R41.2630671-2636956 (ENSCSAVG00000008739) Cisavi.CG.ENS81.R41.2650388-2654574 (ENSCSAVG00000008742) Cisavi.CG.ENS81.R41.2655032-2666782 (ENSCSAVG00000008745) Cisavi.CG.ENS81.R41.2668302-2671144 (ENSCSAVG00000008751) Cisavi.CG.ENS81.R41.2672350-2673856 (ENSCSAVG00000008756) Cisavi.CG.ENS81.R41.2674904-2677885 (ENSCSAVG00000008758) Cisavi.CG.ENS81.R41.2678689-2679973 (ENSCSAVG00000008763) Cisavi.CG.ENS81.R41.2681426-2682337 (ENSCSAVG00000008774) Cisavi.CG.ENS81.R41.2699023-2705799 (ENSCSAVG00000008775) Cisavi.CG.ENS81.R41.2718235-2727787 (ENSCSAVG00000008815) Cisavi.CG.ENS81.R41.2733259-2738140 (ENSCSAVG00000008817) Cisavi.CG.ENS81.R41.2742188-2746453 (ENSCSAVG00000008859) Cisavi.CG.ENS81.R41.2748532-2752882 (ENSCSAVG00000008863) Cisavi.CG.ENS81.R41.2764342-2766860 (ENSCSAVG00000008893) Cisavi.CG.ENS81.R41.2775065-2777350 (ENSCSAVG00000008897) Cisavi.CG.ENS81.R41.2777938-2783286 (ENSCSAVG00000008900) Cisavi.CG.ENS81.R41.2788197-2790810 (ENSCSAVG00000008903) Cisavi.CG.ENS81.R41.2796333-2801012 (ENSCSAVG00000008905) Click to show this node (14_Phallusia) 14_Phallusia speciation node (click to collapse) Click to hide this line (Phmamm) Phmamm terminal node Phmamm - Chr:S1229 Phmamm.CG.MTP2014.S1229.g14169 Phmamm.CG.MTP2014.S1229.g14170 Phmamm.CG.MTP2014.S1229.g14171 Phmamm.CG.MTP2014.S1229.g14172 Phmamm.CG.MTP2014.S1229.g14173 Phmamm.CG.MTP2014.S1229.g14174 Phmamm.CG.MTP2014.S1229.g14175 Click to show this node (34_Deuterostomia) 34_Deuterostomia duplication node (click to collapse) Click to hide this line (34_Deuterostomia) 34_Deuterostomia speciation node (click to collapse) 34_Deuterostomia (~10 My ago) Click to hide this line (33) 33 speciation node (click to collapse) 33 (~10 My ago) Click to hide this line (Spur) Spur terminal node Spur - Chr:Scaffold7392 Click to hide this line (Skow) Skow terminal node Skow - scaffold_1835 Sakowv30035014m.g Sakowv30035020m.g Sakowv30035016m.g Click to show this node (30_Chordata) 30_Chordata speciation node (click to collapse) Click to hide this line (Bbel) Bbel terminal node Bbel - scaffold231 119350R 119360R 119380R 119390F 119400F 119410F 119420F 119430F 119440R 119450R 119460F 119470R Click to show this node (34_Deuterostomia) 34_Deuterostomia speciation node (click to collapse) Click to show this node (30_Chordata) 30_Chordata speciation node (click to collapse) Click to show this node (28) 28 speciation node (click to collapse) Click to show this node (26_Sarcopterygii) 26_Sarcopterygii duplication node (click to collapse) Click to show this node (26_Sarcopterygii) 26_Sarcopterygii duplication node (click to collapse) Click to show this node (26_Sarcopterygii) 26_Sarcopterygii speciation node (click to collapse) Click to hide this line (Lcha) Lcha terminal node Lcha - Chr:JH131149.1 Click to show this node (26_Sarcopterygii) 26_Sarcopterygii duplication node (click to collapse) Click to show this node (26_Sarcopterygii) 26_Sarcopterygii speciation node (click to collapse) Click to hide this line (Lcha) Lcha terminal node Lcha - Chr:JH128836.1 ENSLACG00000005964 ENSLACG00000022349 Click to show this node (26_Sarcopterygii) 26_Sarcopterygii speciation node (click to collapse) Click to hide this line (25_Amniota) 25_Amniota speciation node (click to collapse) 25_Amniota (~10 My ago) - block_11 Fam006875.a.a Fam006643.a.b.a.b Fam003185.B.b Fam003105.B Fam004115.a.b Fam006793.A.a Fam002548.E.a Fam004122.A.a.a.b Fam006511.b.b Fam006176 Fam003960.A Fam006174.A.b Fam005119.a Fam006096.b.b Fam005733.b Fam002326.A Click to show this node (21_Archelosauria) 21_Archelosauria speciation node (click to collapse) Click to hide this line (Psin) Psin terminal node Psin - Chr:JH207663.1 ENSPSIG00000015957 ENSPSIG00000005353 ENSPSIG00000006003 ENSPSIG00000006010 ENSPSIG00000000958 ENSPSIG00000006338 ENSPSIG00000006482 ENSPSIG00000007866 ENSPSIG00000008043 ENSPSIG00000009075 ENSPSIG00000009140 ENSPSIG00000009194 ENSPSIG00000009368 ENSPSIG00000010079 ENSPSIG00000010407 ENSPSIG00000010552 ENSPSIG00000010583 ENSPSIG00000010609 ENSPSIG00000011634 ENSPSIG00000011746 ENSPSIG00000012012 ENSPSIG00000012028 ENSPSIG00000012187 ENSPSIG00000012234 Click to hide this line (24_Euarchontoglires) 24_Euarchontoglires speciation node (click to collapse) 24_Euarchontoglires (~10 My ago) - block_27 Fam004609.a.a.a.a.b.a.b Fam004609.a.a.b Fam005733.b Fam006096.b.b Fam005119.a Fam006174.A.b Fam003960.A Fam006176 Fam006511.b.b Fam004122.A.a.b Fam002548.E.a Fam006793.A.a Fam004115.a.b Fam002345.Z.a Fam003105.B Fam003185.B.b Fam006643.a.b.a.b Click to hide this line (Mmus) Mmus terminal node Mmus - Chr:13 ENSMUSG00000021645 ENSMUSG00000078945 ENSMUSG00000071203 ENSMUSG00000078942 ENSMUSG00000021640 ENSMUSG00000021639 ENSMUSG00000021638 ENSMUSG00000021636 ENSMUSG00000021635 ENSMUSG00000078941 ENSMUSG00000052293 ENSMUSG00000048924 ENSMUSG00000069089 ENSMUSG00000061474 ENSMUSG00000045273 ENSMUSG00000021629 ENSMUSG00000041417 ENSMUSG00000021624 ENSMUSG00000034751 ENSMUSG00000032621 ENSMUSG00000021709 ENSMUSG00000021710 ENSMUSG00000042743 ENSMUSG00000021711 ENSMUSG00000021712 ENSMUSG00000021713 ENSMUSG00000021714 ENSMUSG00000046169 ENSMUSG00000021715 ENSMUSG00000021716 Click to hide this line (Hsap) Hsap terminal node Hsap - Chr:5 ENSG00000153015 ENSG00000049192 ENSG00000123219 ENSG00000113593 ENSG00000113595 ENSG00000113597 ENSG00000253251 ENSG00000197860 ENSG00000123213 ENSG00000112851 ENSG00000153914 ENSG00000069020 ENSG00000134061 ENSG00000145675 ENSG00000145740 ENSG00000153044 ENSG00000134056 ENSG00000134058 ENSG00000183323 ENSG00000085231 ENSG00000273841 ENSG00000152942 ENSG00000152939 ENSG00000197822 ENSG00000183474 ENSG00000205572 ENSG00000205571 ENSG00000172058 ENSG00000172062 ENSG00000249437 Click to hide this line (26_Sarcopterygii) 26_Sarcopterygii speciation node (click to collapse) 26_Sarcopterygii (~10 My ago) - block_417 Fam004384.b Fam001739.KB.a Click to hide this line (Lcha) Lcha terminal node Lcha - Chr:JH127034.1 ENSLACG00000003109 ENSLACG00000005234 ENSLACG00000006574 ENSLACG00000007565 ENSLACG00000009964 ENSLACG00000010253 ENSLACG00000022342 ENSLACG00000011494 ENSLACG00000012652 ENSLACG00000013518 ENSLACG00000014145 Click to hide this line (25_Amniota) 25_Amniota speciation node (click to collapse) 25_Amniota (~10 My ago) - block_136 Fam002000.A.b.a Fam002339.F.a.b.b Fam004384.b Fam002177.F.b.b.a.b Fam005664.a.b.a Fam001739.KB.a Fam003243.a.b Fam004958.b.b Fam002404.A.b.a Fam002086.d Fam005890.A Fam005816.b Fam003826.b Click to hide this line (24_Euarchontoglires) 24_Euarchontoglires speciation node (click to collapse) 24_Euarchontoglires (~10 My ago) - block_26 Fam003826.b Fam005816.b Fam002336.BH.a.b.a.b Fam002172.B.a.a Fam004796.a.a Fam005890.A Fam002086.d Fam002404.A.b.a Fam004958.b.b Fam003243.a.b Fam001739.KB.a Fam002489.A Fam005664.a.b.a Fam002177.F.b.b.a.b Fam004384.b Fam002339.F.a.b.b Fam002000.A.b.a Fam002607.A.b.b.a Fam005690.a.b Fam007630.b.a.b Fam002503.I.b.b.b.b.b.b.b Fam005683.b Fam007635.b.a.b.b Fam002603.J.a.b.a Fam002773.B Fam002139.A Fam002336.JH.b.a.a Fam004281.A.a.a Fam002447.H.b.a.b Fam007111.b Click to hide this line (Mmus) Mmus terminal node Mmus - Chr:9 ENSMUSG00000032366 ENSMUSG00000052698 ENSMUSG00000091956 ENSMUSG00000047990 ENSMUSG00000035284 ENSMUSG00000032238 ENSMUSG00000032235 ENSMUSG00000062874 ENSMUSG00000032231 ENSMUSG00000059246 ENSMUSG00000011958 ENSMUSG00000033543 ENSMUSG00000032226 ENSMUSG00000032224 ENSMUSG00000032220 ENSMUSG00000032217 ENSMUSG00000032212 ENSMUSG00000042444 ENSMUSG00000074213 ENSMUSG00000054693 ENSMUSG00000032207 ENSMUSG00000032204 ENSMUSG00000013584 ENSMUSG00000032199 ENSMUSG00000092137 ENSMUSG00000041361 ENSMUSG00000032232 ENSMUSG00000032228 ENSMUSG00000038535 ENSMUSG00000032221 Click to hide this line (Hsap) Hsap terminal node Hsap - Chr:15 ENSG00000151575 ENSG00000138587 ENSG00000137871 ENSG00000140262 ENSG00000128849 ENSG00000137878 ENSG00000263155 ENSG00000255529 ENSG00000128918 ENSG00000103569 ENSG00000166035 ENSG00000137845 ENSG00000128923 ENSG00000137776 ENSG00000157450 ENSG00000171989 ENSG00000157483 ENSG00000157470 ENSG00000140297 ENSG00000140307 ENSG00000140299 ENSG00000171956 ENSG00000182718 ENSG00000128915 ENSG00000069667 ENSG00000129003 ENSG00000198535 ENSG00000205502 ENSG00000171914 ENSG00000140416 Click to hide this line (21_Archelosauria) 21_Archelosauria speciation node (click to collapse) 21_Archelosauria (~10 My ago) - block_147 Fam002352.E.b.b Fam002000.A.b.a Fam002339.F.a.b.b Fam004384.b Fam002177.F.b.b.a.b Fam005664.a.b.a Fam001739.KB.a Fam003243.a.b Fam004958.b.b Fam002404.A.b.a Fam002086.d Fam005890.A Fam003826.b Click to hide this line (Ggal) Ggal terminal node Ggal - Chr:10 ENSGALG00000003897 ENSGALG00000003906 ENSGALG00000003913 ENSGALG00000003930 ENSGALG00000003944 ENSGALG00000003970 ENSGALG00000003985 ENSGALG00000026271 ENSGALG00000004038 ENSGALG00000004046 ENSGALG00000004059 ENSGALG00000004087 ENSGALG00000004096 ENSGALG00000004103 ENSGALG00000004150 ENSGALG00000004171 ENSGALG00000025917 ENSGALG00000004192 ENSGALG00000004204 ENSGALG00000004212 ENSGALG00000004230 ENSGALG00000004261 ENSGALG00000004270 ENSGALG00000004283 ENSGALG00000004294 ENSGALG00000004304 ENSGALG00000014375 ENSGALG00000013893 ENSGALG00000023562 ENSGALG00000000725 Click to hide this line (Psin) Psin terminal node Psin - Chr:JH207595.1 ENSPSIG00000010105 ENSPSIG00000010525 ENSPSIG00000010670 ENSPSIG00000010733 Click to show this node (34_Deuterostomia) 34_Deuterostomia duplication node (click to collapse) Click to show this node (34_Deuterostomia) 34_Deuterostomia speciation node (click to collapse) Click to show this node (30_Chordata) 30_Chordata speciation node (click to collapse) Click to show this node (28) 28 speciation node (click to collapse) Click to show this node (16_Ascidiacea) 16_Ascidiacea duplication node (click to collapse) Click to show this node (16_Ascidiacea) 16_Ascidiacea speciation node (click to collapse) Click to show this node (15_Phlebobranchia) 15_Phlebobranchia speciation node (click to collapse) Click to hide this line (14_Phallusia) 14_Phallusia speciation node (click to collapse) 14_Phallusia (~10 My ago) Click to hide this line (Phmamm) Phmamm terminal node Phmamm - Chr:S356 Phmamm.CG.MTP2014.S356.g07726 Phmamm.CG.MTP2014.S356.g07727 Phmamm.CG.MTP2014.S356.g07728 Phmamm.CG.MTP2014.S356.g07729 Phmamm.CG.MTP2014.S356.g07730 Phmamm.CG.MTP2014.S356.g07731 Phmamm.CG.MTP2014.S356.g07732 Phmamm.CG.MTP2014.S356.g07733 Phmamm.CG.MTP2014.S356.g07734 Phmamm.CG.MTP2014.S356.g07735 Phmamm.CG.MTP2014.S356.g07736 Phmamm.CG.MTP2014.S356.g07738 Phmamm.CG.MTP2014.S356.g07739 Click to hide this line (Phfumi) Phfumi terminal node Phfumi - Chr:S18896 Click to hide this line (16_Ascidiacea) 16_Ascidiacea speciation node (click to collapse) 16_Ascidiacea (~10 My ago) Click to hide this line (8_Stolidobranchia) 8_Stolidobranchia speciation node (click to collapse) 8_Stolidobranchia (~10 My ago) - block_528 Fam001759.D.b.b Click to hide this line (2_Molgula) 2_Molgula speciation node (click to collapse) 2_Molgula (~10 My ago) - block_72 Fam001759.D.b.b Fam003137.A Click to hide this line (Moocul) Moocul terminal node Moocul - Chr:S110413 Moocul.CG.ELv1_2.S110413.g11600 Moocul.CG.ELv1_2.S110413.g11601 Moocul.CG.ELv1_2.S110413.g11602 Moocul.CG.ELv1_2.S110413.g11603 Moocul.CG.ELv1_2.S110413.g11605 Click to hide this line (Moocci) Moocci terminal node Moocci - Chr:S531279 Moocci.CG.ELv1_2.S531279.g20264 Moocci.CG.ELv1_2.S531279.g20266 Moocci.CG.ELv1_2.S531279.g20267 Click to hide this line (7) 7 speciation node (click to collapse) 7 (~10 My ago) - block_491 Fam001759.D.b.b Click to hide this line (Boschl) Boschl terminal node Boschl - Chr:chrUn Boschl.CG.Botznik2013.chrUn.g33537 Boschl.CG.Botznik2013.chrUn.g33545 Boschl.CG.Botznik2013.chrUn.g33546 Boschl.CG.Botznik2013.chrUn.g33547 Boschl.CG.Botznik2013.chrUn.g33553 Boschl.CG.Botznik2013.chrUn.g33554 Boschl.CG.Botznik2013.chrUn.g33555 Boschl.CG.Botznik2013.chrUn.g33556 Boschl.CG.Botznik2013.chrUn.g33557 Boschl.CG.Botznik2013.chrUn.g33558 Boschl.CG.Botznik2013.chrUn.g33559 Boschl.CG.Botznik2013.chrUn.g33568 Boschl.CG.Botznik2013.chrUn.g33573 Boschl.CG.Botznik2013.chrUn.g33574 Boschl.CG.Botznik2013.chrUn.g33577 Boschl.CG.Botznik2013.chrUn.g33579 Boschl.CG.Botznik2013.chrUn.g33580 Boschl.CG.Botznik2013.chrUn.g33582 Boschl.CG.Botznik2013.chrUn.g33583 Boschl.CG.Botznik2013.chrUn.g33584 Boschl.CG.Botznik2013.chrUn.g33586 Boschl.CG.Botznik2013.chrUn.g33588 Boschl.CG.Botznik2013.chrUn.g33589 Boschl.CG.Botznik2013.chrUn.g33590 Boschl.CG.Botznik2013.chrUn.g33591 Boschl.CG.Botznik2013.chrUn.g33593 Boschl.CG.Botznik2013.chrUn.g33596 Boschl.CG.Botznik2013.chrUn.g33597 Boschl.CG.Botznik2013.chrUn.g33598 Boschl.CG.Botznik2013.chrUn.g33599 Click to hide this line (6_Halocynthia) 6_Halocynthia speciation node (click to collapse) 6_Halocynthia (~10 My ago) - block_314 Fam001681.GB Fam002162.L Fam001759.D.b.b Fam001759.D.a Fam003810.A Click to hide this line (Harore) Harore terminal node Harore - Chr:S434 Harore.CG.MTP2014.S434.g01998 Harore.CG.MTP2014.S434.g11928 Harore.CG.MTP2014.S434.g02659 Harore.CG.MTP2014.S434.g11673 Harore.CG.MTP2014.S434.g11845 Harore.CG.MTP2014.S434.g12553 Harore.CG.MTP2014.S434.g04686 Click to hide this line (Haaura) Haaura terminal node Haaura - Chr:S205 Haaura.CG.MTP2014.S205.g03276 Haaura.CG.MTP2014.S205.g03277 Haaura.CG.MTP2014.S205.g03278 Haaura.CG.MTP2014.S205.g03279 Haaura.CG.MTP2014.S205.g03280 Haaura.CG.MTP2014.S205.g03281 Haaura.CG.MTP2014.S205.g03282 Haaura.CG.MTP2014.S205.g03283 Haaura.CG.MTP2014.S205.g03284 Haaura.CG.MTP2014.S205.g03286 Haaura.CG.MTP2014.S205.g03287 Click to show this node (15_Phlebobranchia) 15_Phlebobranchia speciation node (click to collapse) Click to hide this line (11_Ciona) 11_Ciona speciation node (click to collapse) 11_Ciona (~10 My ago) - block_282 Fam010116 Fam008596 Fam004541 Fam001759.T.b Click to hide this line (Cisavi) Cisavi terminal node Cisavi - Chr:reftig_125 Cisavi.CG.ENS81.R125.93093-108455 (ENSCSAVG00000000786) Cisavi.CG.ENS81.R125.121610-127779 (ENSCSAVG00000000796) Cisavi.CG.ENS81.R125.127785-131006 (ENSCSAVG00000000801) Cisavi.CG.ENS81.R125.138355-142167 (ENSCSAVG00000000805) Cisavi.CG.ENS81.R125.146375-148520 (ENSCSAVG00000000807) Cisavi.CG.ENS81.R125.151313-152613 (ENSCSAVG00000000808) Cisavi.CG.ENS81.R125.156194-162875 (ENSCSAVG00000000809) Cisavi.CG.ENS81.R125.170829-175266 (ENSCSAVG00000000832) Cisavi.CG.ENS81.R125.175187-182506 (ENSCSAVG00000000841) Cisavi.CG.ENS81.R125.183059-191775 (ENSCSAVG00000001025) Cisavi.CG.ENS81.R125.184301-185716 (ENSCSAVG00000001028) Cisavi.CG.ENS81.R125.190867-191484 (ENSCSAVG00000001029) Cisavi.CG.ENS81.R125.198344-199923 (ENSCSAVG00000001030) Cisavi.CG.ENS81.R125.227280-227729 (ENSCSAVG00000001035) Cisavi.CG.ENS81.R125.390189-406686 (ENSCSAVG00000001036) Click to hide this line (Cirobu) Cirobu terminal node Cirobu - Chr:KhC7 KH2012:KH.C7.709 KH2012:KH.C7.697 KH2012:KH.C7.666 KH2012:KH.C7.100 KH2012:KH.C7.374 KH2012:KH.C7.662 KH2012:KH.C7.655 KH2012:KH.C7.6 KH2012:KH.C7.788 KH2012:KH.C7.327 KH2012:KH.C7.700 KH2012:KH.C7.418 KH2012:KH.C7.347 KH2012:KH.C7.282 KH2012:KH.C7.734 KH2012:KH.C7.628 KH2012:KH.C7.545 KH2012:KH.C7.77 KH2012:KH.C7.126 KH2012:KH.C7.490 KH2012:KH.C7.256 KH2012:KH.C7.62 KH2012:KH.C7.722 KH2012:KH.C7.447 KH2012:KH.C7.345 KH2012:KH.C7.614 KH2012:KH.C7.69 KH2012:KH.C7.49 KH2012:KH.C7.147 KH2012:KH.C7.621 Click to show this node (34_Deuterostomia) 34_Deuterostomia duplication node (click to collapse) Click to show this node (34_Deuterostomia) 34_Deuterostomia duplication node (click to collapse) Click to hide this line (34_Deuterostomia) 34_Deuterostomia speciation node (click to collapse) 34_Deuterostomia (~10 My ago) Click to show this node (30_Chordata) 30_Chordata speciation node (click to collapse) Click to show this node (Bbel) Bbel duplication node (click to collapse) Click to hide this line (Bbel) Bbel terminal node Bbel - scaffold19 089940R 089950F 089960R 089970F 089980F 089990R 090000F 090010R 090020R 090030F 090040R 090050F 090060R 090070F 090100R 090110F 090120R 090130F 090140F 090150F 090160R 090170R 090180R 090190R 090200F 090210F 090220R 090230F 090240F Click to hide this line (Bbel) Bbel terminal node Bbel - scaffold19 089930F 089940R 089950F 089960R 089970F 089980F 089990R 090000F 090010R 090020R 090030F 090040R 090050F 090060R 090070F 090100R 090110F 090120R 090130F 090140F 090150F 090160R 090170R 090180R 090190R 090200F 090210F 090220R 090230F Click to hide this line (33) 33 speciation node (click to collapse) 33 (~10 My ago) Click to hide this line (Skow) Skow terminal node Skow - scaffold_140 Sakowv30003894m.g Sakowv30003879m.g Sakowv30003887m.g Sakowv30003871m.g Sakowv30003902m.g Sakowv30003909m.g Sakowv30003873m.g Sakowv30003903m.g Sakowv30003878m.g Sakowv30003885m.g Sakowv30003900m.g Sakowv30003898m.g Sakowv30003876m.g Sakowv30003892m.g Sakowv30003899m.g Sakowv30003906m.g Sakowv30003905m.g Sakowv30003888m.g Sakowv30003883m.g Sakowv30003886m.g Sakowv30003893m.g Sakowv30003884m.g Sakowv30003897m.g Sakowv30003907m.g Click to show this node (Spur) Spur duplication node (click to collapse) Click to hide this line (Spur) Spur terminal node Spur - Chr:Scaffold565 SPU_001945 SPU_009505 SPU_009506 SPU_004567 SPU_003349 SPU_003064 SPU_027136 SPU_021765 SPU_027137 SPU_003527 SPU_017455 SPU_018382 SPU_019951 Click to hide this line (Spur) Spur terminal node Spur - Chr:Scaffold565 SPU_001945 SPU_009505 SPU_009506 SPU_004567 SPU_003349 SPU_003064 SPU_027136 SPU_021765 SPU_027137 SPU_003527 SPU_017455 SPU_018382 SPU_019951 Click to show this node (34_Deuterostomia) 34_Deuterostomia speciation node (click to collapse) Click to show this node (30_Chordata) 30_Chordata speciation node (click to collapse) Click to show this node (28) 28 speciation node (click to collapse) Click to show this node (26_Sarcopterygii) 26_Sarcopterygii duplication node (click to collapse) Click to show this node (26_Sarcopterygii) 26_Sarcopterygii duplication node (click to collapse) Click to hide this line (26_Sarcopterygii) 26_Sarcopterygii speciation node (click to collapse) 26_Sarcopterygii (~10 My ago) Click to hide this line (Lcha) Lcha terminal node Lcha - Chr:JH128061.1 ENSLACG00000002394 ENSLACG00000004596 ENSLACG00000007787 Click to show this node (25_Amniota) 25_Amniota duplication node (click to collapse) Click to hide this line (25_Amniota) 25_Amniota speciation node (click to collapse) 25_Amniota (~10 My ago) - block_29 Fam008835.b Fam007083.a.a Fam002310.LD.b.b.a.b.a Fam002380.C.a Fam003045.B.b.a.a Fam006206.A.b.a.d Fam006206.A.b.a.c Fam001719.IC.a.b.b Fam006383.a Fam007441.a.a Fam001841.H.a.b.b Fam002464.A.b Fam002213.B.a Fam002503.I.b.b.a.b Fam005631.a Fam001842.d Fam003116.D.d.b.b Fam004363 Fam001713.K.c.a Fam005761.A Fam005034.a.a Click to show this node (21_Archelosauria) 21_Archelosauria speciation node (click to collapse) Click to hide this line (Psin) Psin terminal node Psin - Chr:JH209423.1 ENSPSIG00000000717 ENSPSIG00000010585 ENSPSIG00000010817 ENSPSIG00000010870 ENSPSIG00000011509 ENSPSIG00000011927 ENSPSIG00000012879 ENSPSIG00000012919 ENSPSIG00000013328 ENSPSIG00000013505 ENSPSIG00000014327 ENSPSIG00000014364 ENSPSIG00000014459 ENSPSIG00000015417 ENSPSIG00000016020 ENSPSIG00000006746 ENSPSIG00000006787 ENSPSIG00000007960 ENSPSIG00000011531 ENSPSIG00000011978 ENSPSIG00000011981 ENSPSIG00000011987 ENSPSIG00000011997 ENSPSIG00000012182 ENSPSIG00000000724 ENSPSIG00000012530 ENSPSIG00000012550 Click to hide this line (24_Euarchontoglires) 24_Euarchontoglires speciation node (click to collapse) 24_Euarchontoglires (~10 My ago) - block_7 Fam002310.LD.b.b.a.b.a Fam002380.C.a Fam003045.B.b.a.a Fam006206.A.b.a.d Fam003852.A.a.b.b.b Fam006206.A.b.a.c Fam001719.IC.a.b.b Fam006383.a Fam007441.a.a Fam001841.H.a.b.b Fam002464.A.b Fam003199.QC.b.b.a Fam002213.B.a Fam002503.I.b.b.a.b Fam005631.a Fam001842.d Fam003116.D.d.b.b Fam004363 Fam001713.K.c.a Fam005761.A Fam005034.a.a Fam003340.b Fam003052.A.b.b Fam006169.A.b.a Fam007589 Fam002035.J Fam009680.b.b Fam002118.D.b.a.a Fam001696.D.b.b Fam001814.C Click to hide this line (Mmus) Mmus terminal node Mmus - Chr:3 ENSMUSG00000027677 ENSMUSG00000027676 ENSMUSG00000027680 ENSMUSG00000027679 ENSMUSG00000074637 ENSMUSG00000037400 ENSMUSG00000027708 ENSMUSG00000027709 ENSMUSG00000047696 ENSMUSG00000027710 ENSMUSG00000033883 ENSMUSG00000058400 ENSMUSG00000027712 ENSMUSG00000027713 ENSMUSG00000027714 ENSMUSG00000037325 ENSMUSG00000027716 ENSMUSG00000037270 ENSMUSG00000027719 ENSMUSG00000027720 ENSMUSG00000027718 ENSMUSG00000045031 ENSMUSG00000051444 ENSMUSG00000037225 ENSMUSG00000050174 ENSMUSG00000027722 ENSMUSG00000037211 ENSMUSG00000058174 ENSMUSG00000044864 ENSMUSG00000046743 Click to hide this line (Hsap) Hsap terminal node Hsap - Chr:4 ENSG00000150961 ENSG00000172403 ENSG00000172399 ENSG00000145390 ENSG00000164096 ENSG00000145384 ENSG00000138735 ENSG00000164109 ENSG00000138738 ENSG00000173376 ENSG00000050730 ENSG00000186867 ENSG00000164111 ENSG00000164112 ENSG00000123737 ENSG00000138686 ENSG00000138741 ENSG00000138688 ENSG00000164113 ENSG00000109471 ENSG00000138684 ENSG00000181004 ENSG00000138685 ENSG00000170917 ENSG00000145375 ENSG00000164056 ENSG00000151458 ENSG00000196159 ENSG00000164066 ENSG00000151475 Click to show this node (25_Amniota) 25_Amniota speciation node (click to collapse) Click to show this node (21_Archelosauria) 21_Archelosauria speciation node (click to collapse) Click to hide this line (Ggal) Ggal terminal node Ggal - Chr:4 ENSGALG00000023120 ENSGALG00000011812 ENSGALG00000011823 ENSGALG00000011831 ENSGALG00000011833 ENSGALG00000011834 ENSGALG00000011835 ENSGALG00000011837 ENSGALG00000026741 ENSGALG00000011844 ENSGALG00000011849 ENSGALG00000011862 ENSGALG00000011869 ENSGALG00000011875 ENSGALG00000011880 ENSGALG00000011884 ENSGALG00000011885 ENSGALG00000011890 ENSGALG00000011961 ENSGALG00000011962 ENSGALG00000011963 ENSGALG00000011967 ENSGALG00000011974 ENSGALG00000011982 ENSGALG00000011986 ENSGALG00000011990 ENSGALG00000011991 ENSGALG00000011994 ENSGALG00000011998 ENSGALG00000012000 Click to hide this line (26_Sarcopterygii) 26_Sarcopterygii speciation node (click to collapse) 26_Sarcopterygii (~10 My ago) Click to hide this line (25_Amniota) 25_Amniota speciation node (click to collapse) 25_Amniota (~10 My ago) - block_3 Fam003097.b Fam006169.A.a Fam002158.E.b Fam008602.a Fam007461.b.b.b Fam004455.c Fam007021.a Fam004305.A.a.b.b Fam006729.a Fam002648.A.b.b Fam005639.b Fam002648.A.b.a.b Fam005617.A.b Fam004360.a Fam004675.a Fam001678.G.c.a.a Fam005795.A Fam005796.A.b Fam002987.B Fam002240.E.a Fam003116.A.b.a Fam004452.a.a.a.b Fam005809.a.b.b Fam003077.B.b.a.b Fam004005.a Fam003016.B.b Fam002573.B Fam002351.A.a Fam001143.a Fam002143.B.b Click to hide this line (24_Euarchontoglires) 24_Euarchontoglires speciation node (click to collapse) 24_Euarchontoglires (~10 My ago) - block_17 Fam003097.b Fam006169.A.a Fam002158.E.b Fam008602.a Fam007461.b.a Fam007461.b.b.b Fam004455.c Fam007021.a Fam004305.A.a.b.b Fam006729.a Fam002648.A.b.b Fam005639.b Fam005617.A.b Fam004360.a Fam004675.a Fam001678.G.c.a.a Fam005795.A Fam005796.A.b Fam002987.B Fam002240.E.a Fam003116.A.b.a Fam004452.a.a.a.b Fam005809.a.b.b Fam003077.B.b.a.b Fam004005.a Fam003016.B.b Fam002573.B.b Fam001143.a Fam002143.B.b Fam005648.A.a.a Click to hide this line (Mmus) Mmus terminal node Mmus - Chr:3 ENSMUSG00000042997 ENSMUSG00000049504 ENSMUSG00000027744 ENSMUSG00000037016 ENSMUSG00000078742 ENSMUSG00000027746 ENSMUSG00000027748 ENSMUSG00000027750 ENSMUSG00000027751 ENSMUSG00000094487 ENSMUSG00000027752 ENSMUSG00000036632 ENSMUSG00000027796 ENSMUSG00000036615 ENSMUSG00000056306 ENSMUSG00000036580 ENSMUSG00000048655 ENSMUSG00000027794 ENSMUSG00000027797 ENSMUSG00000094962 ENSMUSG00000027799 ENSMUSG00000056947 ENSMUSG00000027800 ENSMUSG00000027801 ENSMUSG00000027803 ENSMUSG00000036513 ENSMUSG00000074591 ENSMUSG00000036503 ENSMUSG00000027805 ENSMUSG00000027806 Click to hide this line (Hsap) Hsap terminal node Hsap - Chr:13 ENSG00000189167 ENSG00000139618 ENSG00000139597 ENSG00000244754 ENSG00000083642 ENSG00000133116 ENSG00000133121 ENSG00000133119 ENSG00000180660 ENSG00000172915 ENSG00000133083 ENSG00000250709 ENSG00000120669 ENSG00000242715 ENSG00000133104 ENSG00000180440 ENSG00000133111 ENSG00000120693 ENSG00000120697 ENSG00000120699 ENSG00000102710 ENSG00000279238 ENSG00000180138 ENSG00000133110 ENSG00000133107 ENSG00000120686 ENSG00000150893 ENSG00000133115 ENSG00000120685 ENSG00000188811 Click to hide this line (21_Archelosauria) 21_Archelosauria speciation node (click to collapse) 21_Archelosauria (~10 My ago) - block_1 Fam001845.E Fam003097.b Fam006169.A.a Fam002158.E.b Fam008602.a.b Fam007461.b.b.b Fam004455.c Fam007021.a Fam004305.A.a.b.b Fam006729.a Fam005639.b Fam002648.A.b.a.b Fam005617.A.b Fam004360.a Fam004675.a Fam001678.G.c.a.a Fam005795.A Fam005796.A.b Fam002987.B Fam002240.E.a Fam003116.A.b.a Fam004452.a.a.a.b Fam005809.a.b.b Fam003077.B.b.a.b Fam004005.a Fam003016.B.b Fam002573.B Fam002351.A.a Fam001143.a Fam002143.B.b Click to hide this line (Ggal) Ggal terminal node Ggal - Chr:1 ENSGALG00000017037 ENSGALG00000017038 ENSGALG00000017039 ENSGALG00000017040 ENSGALG00000017041 ENSGALG00000017042 ENSGALG00000017044 ENSGALG00000022791 ENSGALG00000016601 ENSGALG00000017046 ENSGALG00000017047 ENSGALG00000017048 ENSGALG00000017049 ENSGALG00000017050 ENSGALG00000019087 ENSGALG00000017053 ENSGALG00000017056 ENSGALG00000017062 ENSGALG00000017059 ENSGALG00000017064 ENSGALG00000017065 ENSGALG00000017068 ENSGALG00000017070 ENSGALG00000017071 ENSGALG00000017072 ENSGALG00000017073 ENSGALG00000017074 ENSGALG00000017075 ENSGALG00000017076 ENSGALG00000017077 Click to hide this line (Psin) Psin terminal node Psin - Chr:JH208040.1 ENSPSIG00000002376 ENSPSIG00000002396 ENSPSIG00000002398 ENSPSIG00000002406 ENSPSIG00000002447 ENSPSIG00000002483 ENSPSIG00000002518 ENSPSIG00000000430 ENSPSIG00000000448 ENSPSIG00000002532 ENSPSIG00000002535 ENSPSIG00000002543 Click to hide this line (Lcha) Lcha terminal node Lcha - Chr:JH128815.1 ENSLACG00000003879 ENSLACG00000005361 ENSLACG00000006128 Click to show this node (34_Deuterostomia) 34_Deuterostomia speciation node (click to collapse) Click to show this node (30_Chordata) 30_Chordata speciation node (click to collapse) Click to show this node (28) 28 speciation node (click to collapse) Click to hide this line (16_Ascidiacea) 16_Ascidiacea speciation node (click to collapse) 16_Ascidiacea (~10 My ago) Click to hide this line (15_Phlebobranchia) 15_Phlebobranchia speciation node (click to collapse) 15_Phlebobranchia (~10 My ago) - block_152 Fam000991 Fam002230.D Fam005551.A Click to hide this line (14_Phallusia) 14_Phallusia speciation node (click to collapse) 14_Phallusia (~10 My ago) - block_303 Fam000991 Fam002230.D Fam005551.A Click to hide this line (Phmamm) Phmamm terminal node Phmamm - Chr:S201 Phmamm.CG.MTP2014.S201.g05241 Phmamm.CG.MTP2014.S201.g05242 Phmamm.CG.MTP2014.S201.g05243 Phmamm.CG.MTP2014.S201.g05244 Phmamm.CG.MTP2014.S201.g05246 Phmamm.CG.MTP2014.S201.g05247 Phmamm.CG.MTP2014.S201.g05248 Phmamm.CG.MTP2014.S201.g05249 Phmamm.CG.MTP2014.S201.g05250 Phmamm.CG.MTP2014.S201.g05251 Phmamm.CG.MTP2014.S201.g05252 Phmamm.CG.MTP2014.S201.g05253 Phmamm.CG.MTP2014.S201.g05254 Phmamm.CG.MTP2014.S201.g05255 Phmamm.CG.MTP2014.S201.g05256 Phmamm.CG.MTP2014.S201.g05257 Phmamm.CG.MTP2014.S201.g05258 Click to hide this line (Phfumi) Phfumi terminal node Phfumi - Chr:S18839 Click to hide this line (11_Ciona) 11_Ciona speciation node (click to collapse) 11_Ciona (~10 My ago) - block_199 Fam005551.A Fam002230.D Fam000991 Fam001956.G.a Fam008365 Fam011641 Click to hide this line (Cirobu) Cirobu terminal node Cirobu - Chr:KhC2 KH2012:KH.C2.1008 KH2012:KH.C2.857 KH2012:KH.C2.468 KH2012:KH.C2.292 KH2012:KH.C2.823 KH2012:KH.C2.435 KH2012:KH.C2.1104 KH2012:KH.C2.1062 KH2012:KH.C2.1131 KH2012:KH.C2.107 KH2012:KH.C2.410 KH2012:KH.C2.895 KH2012:KH.C2.947 KH2012:KH.C2.893 KH2012:KH.C2.294 KH2012:KH.C2.141 KH2012:KH.C2.701 KH2012:KH.C2.513 KH2012:KH.C2.288 KH2012:KH.C2.1138 KH2012:KH.C2.605 KH2012:KH.C2.1144 KH2012:KH.C2.994 KH2012:KH.C2.243 KH2012:KH.C2.413 KH2012:KH.C2.905 KH2012:KH.C2.456 KH2012:KH.C2.924 KH2012:KH.C2.1030 KH2012:KH.C2.517 Click to hide this line (Cisavi) Cisavi terminal node Cisavi - Chr:reftig_19 Cisavi.CG.ENS81.R19.3068081-3072851 (ENSCSAVG00000010189) Cisavi.CG.ENS81.R19.3075041-3078865 (ENSCSAVG00000010191) Cisavi.CG.ENS81.R19.3085396-3086282 (ENSCSAVG00000010196) Cisavi.CG.ENS81.R19.3092782-3096090 (ENSCSAVG00000010197) Cisavi.CG.ENS81.R19.3096132-3102562 (ENSCSAVG00000010198) Cisavi.CG.ENS81.R19.3104607-3107583 (ENSCSAVG00000010202) Cisavi.CG.ENS81.R19.3119754-3121849 (ENSCSAVG00000010205) Cisavi.CG.ENS81.R19.3127320-3132707 (ENSCSAVG00000010206) Cisavi.CG.ENS81.R19.3147333-3152893 (ENSCSAVG00000010230) Cisavi.CG.ENS81.R19.3165012-3169300 (ENSCSAVG00000010231) Cisavi.CG.ENS81.R19.3177952-3183355 (ENSCSAVG00000010236) Cisavi.CG.ENS81.R19.3189315-3194764 (ENSCSAVG00000010259) Cisavi.CG.ENS81.R19.3195894-3196788 (ENSCSAVG00000010292) Cisavi.CG.ENS81.R19.3203662-3206657 (ENSCSAVG00000010295) Cisavi.CG.ENS81.R19.3207854-3210931 (ENSCSAVG00000010299) Cisavi.CG.ENS81.R19.3231850-3232757 (ENSCSAVG00000010341) Cisavi.CG.ENS81.R19.3249708-3253030 (ENSCSAVG00000010342) Cisavi.CG.ENS81.R19.3255972-3259530 (ENSCSAVG00000010343) Cisavi.CG.ENS81.R19.3270855-3275769 (ENSCSAVG00000010344) Cisavi.CG.ENS81.R19.3289410-3293925 (ENSCSAVG00000010345) Cisavi.CG.ENS81.R19.3294599-3298265 (ENSCSAVG00000010365) Cisavi.CG.ENS81.R19.3300965-3302459 (ENSCSAVG00000010366) Cisavi.CG.ENS81.R19.3306546-3309237 (ENSCSAVG00000010368) Cisavi.CG.ENS81.R19.3312448-3313371 (ENSCSAVG00000010369) Cisavi.CG.ENS81.R19.3314244-3314496 (ENSCSAVG00000010370) Cisavi.CG.ENS81.R19.3314579-3316964 (ENSCSAVG00000010371) Cisavi.CG.ENS81.R19.3338847-3340205 (ENSCSAVG00000010373) Cisavi.CG.ENS81.R19.3341131-3347424 (ENSCSAVG00000010374) Cisavi.CG.ENS81.R19.3347886-3359095 (ENSCSAVG00000010407) Cisavi.CG.ENS81.R19.3369200-3377373 (ENSCSAVG00000010415) Click to show this node (8_Stolidobranchia) 8_Stolidobranchia speciation node (click to collapse) Click to hide this line (2_Molgula) 2_Molgula speciation node (click to collapse) 2_Molgula (~10 My ago) Click to hide this line (Moocci) Moocci terminal node Moocci - Chr:S600146 Moocci.CG.ELv1_2.S600146.g24644 Moocci.CG.ELv1_2.S600146.g24645 Moocci.CG.ELv1_2.S600146.g24646 Moocci.CG.ELv1_2.S600146.g24647 Click to hide this line (Moocul) Moocul terminal node Moocul - Chr:S19458 Moocul.CG.ELv1_2.S19458.g00706 Moocul.CG.ELv1_2.S19458.g00707 Moocul.CG.ELv1_2.S19458.g00708 Moocul.CG.ELv1_2.S19458.g00710 Fam001699.Z Fam001699.Z Fam001699.Z Fam001699.Z Phfumi.CG.MTP2014.S2006.g04393 Phmamm.CG.MTP2014.S272.g06493 Fam001699.Z Cisavi.CG.ENS81.R30.1325071-1329372 (ENSCSAVG00000003185) KH2012:KH.L139.17 Fam001699.Z Fam001699.Z Boschl.CG.Botznik2013.chr5.g22940 Fam001699.Z Haaura.CG.MTP2014.S506.g05455 Harore.CG.MTP2014.S86.g06412 Fam001699.Z Moocci.CG.ELv1_2.S595707.g24283 Moocul.CG.ELv1_2.S4192.g00105 Fam001699.Z.a Fam001699.Z.a ENSMUSG00000051592 ENSG00000147082 ENSLACG00000012419 ENSGALG00000025810 ENSLACG00000014828 Fam001699.QB.a.b.a ENSMUSG00000023279 ENSG00000130385 ENSGALG00000004742 ENSLACG00000013361 Fam001699.Y Fam001699.Y Sakowv30029269m.g SPU_006444 271940F Fam001699.V.a Moocci.CG.ELv1_2.S194844.g03954 Moocul.CG.ELv1_2.S114545.g13501 Fam001699.V.b Fam001699.V.b Fam001699.UC.b Fam001699.V.b Harore.CG.MTP2014.S4.g03418 Harore.CG.MTP2014.S4.g08164 Haaura.CG.MTP2014.S5.g00163 Haaura.CG.MTP2014.S5.g00164 Boschl.CG.Botznik2013.chr7.g66100 Fam001699.V.b Fam001699.V.b KH2012:KH.C4.213 KH2012:KH.C4.684 Cisavi.CG.ENS81.R41.2754078-2756825 (ENSCSAVG00000008864) Phmamm.CG.MTP2014.S1229.g14176 Fam001699.W Fam001699.W SPU_015285 Sakowv30035015m.g 119370F ENSLACG00000001967 ENSLACG00000006996 Fam001699.X.a.b.b ENSPSIG00000010545 Fam001699.X.a.b.b ENSMUSG00000041431 ENSG00000134057 Fam001699.X.b ENSLACG00000002466 Fam001699.X.b Fam001699.X.b ENSMUSG00000032218 ENSG00000157456 Fam001699.X.b ENSGALG00000004161 ENSPSIG00000010738 Fam001699.R.a Phmamm.CG.MTP2014.S356.g07737 Phfumi.CG.MTP2014.S18896.g09654 Fam001699.R.b Fam001699.R.b Fam001699.R.b Moocul.CG.ELv1_2.S110413.g11604 Moocci.CG.ELv1_2.S531279.g20265 Fam001699.R.b Boschl.CG.Botznik2013.chrUn.g33578 Fam001699.R.b Harore.CG.MTP2014.S434.g01137 Haaura.CG.MTP2014.S205.g03285 Fam001699.R.b Cisavi.CG.ENS81.R125.81285-83875 (ENSCSAVG00000000785) KH2012:KH.C7.103 Fam001699.S 090080F 090090F 090080F 090090F Fam001699.S Sakowv30003889m.g SPU_003528 SPU_011191 SPU_003528 SPU_011191 Fam001699.T.a.a ENSLACG00000001133 Fam001699.T.a.a.a ENSPSIG00000016550 Fam001699.T.a.a.a ENSMUSG00000027715 ENSG00000145386 ENSGALG00000011881 Fam001699.T.a.b Fam001699.T.a.b Fam001699.T.a.b ENSMUSG00000027793 ENSG00000133101 Fam001699.T.a.b ENSGALG00000017052 ENSPSIG00000002519 ENSLACG00000007430 Fam001699.U Fam001699.U Fam001699.U Phmamm.CG.MTP2014.S201.g05245 Phfumi.CG.MTP2014.S18839.g09648 Fam001699.U KH2012:KH.C2.821 Cisavi.CG.ENS81.R19.3212129-3215308 (ENSCSAVG00000010339) Fam001699.U Moocci.CG.ELv1_2.S600146.g24643 Moocul.CG.ELv1_2.S19458.g00709 Fam000121.b Phfumi.CG.MTP2014.S2006.g04392 Phmamm.CG.MTP2014.S272.g06494