Reference Gene Name: Phfumi.CG.MTP2014.S1067.g03195 Ensembl
Reference Species : Phfumi
Root Species : 34_Deuterostomia (~10 million years) 		34_Deuterostomia Link Wikipedia to Phfumi Link Ensembl
×2 ÷2 Center the view on the reference gene Shift 1 gene on the left Shift 5 genes on the left Shift 1 gene on the right Shift 5 genes on the right Zoom out Show 1 less gene on each side Show 1 more gene on each side Show half the number of genes on each side Show twice more genes on each side Zoom in
Schematic scale
Genomic scale
dN/dS Ratio
Protein Similarity
CNE Track
34_Deuterostomia speciation node (click to collapse) 34_Deuterostomia (~10 My ago) Click to hide this line (30_Chordata) 30_Chordata speciation node (click to collapse) 30_Chordata (~10 My ago) Click to show this node (28) 28 duplication node (click to collapse) Click to hide this line (28) 28 speciation node (click to collapse) 28 (~10 My ago) Click to show this node (16_Ascidiacea) 16_Ascidiacea duplication node (click to collapse) Click to hide this line (16_Ascidiacea) 16_Ascidiacea speciation node (click to collapse) 16_Ascidiacea (~10 My ago) Click to hide this line (15_Phlebobranchia) 15_Phlebobranchia speciation node (click to collapse) 15_Phlebobranchia (~10 My ago) - block_1159 Fam011925 Click to hide this line (14_Phallusia) 14_Phallusia speciation node (click to collapse) 14_Phallusia (~10 My ago) - block_738 Fam011925 Click to hide this line (Phfumi) Phfumi terminal node Phfumi - Chr:S1067 Click to show this node (Phmamm) Phmamm duplication node (click to collapse) Click to hide this line (Phmamm) Phmamm terminal node Phmamm - Chr:S104 Phmamm.CG.MTP2014.S104.g03263 Phmamm.CG.MTP2014.S104.g03264 Phmamm.CG.MTP2014.S104.g03265 Phmamm.CG.MTP2014.S104.g03266 Phmamm.CG.MTP2014.S104.g03267 Phmamm.CG.MTP2014.S104.g03268 Phmamm.CG.MTP2014.S104.g03269 Phmamm.CG.MTP2014.S104.g03270 Phmamm.CG.MTP2014.S104.g03271 Phmamm.CG.MTP2014.S104.g03272 Phmamm.CG.MTP2014.S104.g03273 Phmamm.CG.MTP2014.S104.g03274 Phmamm.CG.MTP2014.S104.g03275 Phmamm.CG.MTP2014.S104.g03276 Phmamm.CG.MTP2014.S104.g03277 Click to hide this line (Phmamm) Phmamm terminal node Phmamm - Chr:S448 Phmamm.CG.MTP2014.S448.g08854 Phmamm.CG.MTP2014.S448.g08855 Phmamm.CG.MTP2014.S448.g08856 Phmamm.CG.MTP2014.S448.g08857 Phmamm.CG.MTP2014.S448.g08858 Phmamm.CG.MTP2014.S448.g08859 Phmamm.CG.MTP2014.S448.g08860 Phmamm.CG.MTP2014.S448.g08861 Phmamm.CG.MTP2014.S448.g08862 Phmamm.CG.MTP2014.S448.g08863 Phmamm.CG.MTP2014.S448.g08865 Phmamm.CG.MTP2014.S448.g08867 Click to hide this line (11_Ciona) 11_Ciona speciation node (click to collapse) 11_Ciona (~10 My ago) - block_1149 Fam011925 Click to hide this line (Cirobu) Cirobu terminal node Cirobu - Chr:KhC1 KH2012:KH.C1.77 KH2012:KH.C1.527 KH2012:KH.C1.276 KH2012:KH.C1.503 KH2012:KH.C1.994 KH2012:KH.C1.91 KH2012:KH.C1.1124 KH2012:KH.C1.870 KH2012:KH.C1.591 KH2012:KH.C1.471 KH2012:KH.C1.278 KH2012:KH.C1.1115 KH2012:KH.C1.440 KH2012:KH.C1.648 KH2012:KH.C1.431 KH2012:KH.C1.1013 KH2012:KH.C1.392 KH2012:KH.C1.1249 KH2012:KH.C1.502 KH2012:KH.C1.607 KH2012:KH.C1.1282 KH2012:KH.C1.134 KH2012:KH.C1.767 KH2012:KH.C1.908 KH2012:KH.C1.348 KH2012:KH.C1.905 KH2012:KH.C1.1108 KH2012:KH.C1.466 KH2012:KH.C1.104 KH2012:KH.C1.564 Click to hide this line (Cisavi) Cisavi terminal node Cisavi - Chr:reftig_62 Cisavi.CG.ENS81.R62.368007-370061 (ENSCSAVG00000001844) Cisavi.CG.ENS81.R62.370785-373596 (ENSCSAVG00000001848) Cisavi.CG.ENS81.R62.380170-381503 (ENSCSAVG00000001852) Cisavi.CG.ENS81.R62.382224-383490 (ENSCSAVG00000001854) Cisavi.CG.ENS81.R62.387418-390227 (ENSCSAVG00000001856) Cisavi.CG.ENS81.R62.397246-398181 (ENSCSAVG00000001860) Cisavi.CG.ENS81.R62.405659-407221 (ENSCSAVG00000001861) Cisavi.CG.ENS81.R62.420501-433256 (ENSCSAVG00000001863) Cisavi.CG.ENS81.R62.437878-440169 (ENSCSAVG00000001907) Cisavi.CG.ENS81.R62.450152-453615 (ENSCSAVG00000001909) Cisavi.CG.ENS81.R62.455106-455702 (ENSCSAVG00000001911) Cisavi.CG.ENS81.R62.456879-480202 (ENSCSAVG00000001912) Cisavi.CG.ENS81.R62.486191-498959 (ENSCSAVG00000002002) Cisavi.CG.ENS81.R62.499467-502631 (ENSCSAVG00000002183) Cisavi.CG.ENS81.R62.505844-507402 (ENSCSAVG00000002241) Cisavi.CG.ENS81.R62.522865-523925 (ENSCSAVG00000002246) Cisavi.CG.ENS81.R62.530418-531155 (ENSCSAVG00000002249) Cisavi.CG.ENS81.R62.531630-535017 (ENSCSAVG00000002253) Cisavi.CG.ENS81.R62.540836-548886 (ENSCSAVG00000002256) Cisavi.CG.ENS81.R62.548911-553039 (ENSCSAVG00000002262) Cisavi.CG.ENS81.R62.556601-568367 (ENSCSAVG00000002276) Cisavi.CG.ENS81.R62.590881-605619 (ENSCSAVG00000002314) Click to show this node (8_Stolidobranchia) 8_Stolidobranchia speciation node (click to collapse) Click to hide this line (2_Molgula) 2_Molgula speciation node (click to collapse) 2_Molgula (~10 My ago) Click to hide this line (Moocci) Moocci terminal node Moocci - Chr:S603940 Moocci.CG.ELv1_2.S603940.g24929 Click to hide this line (Moocul) Moocul terminal node Moocul - Chr:S20077 Moocul.CG.ELv1_2.S20077.g00773 Moocul.CG.ELv1_2.S20077.g00774 Moocul.CG.ELv1_2.S20077.g00776 Moocul.CG.ELv1_2.S20077.g00777 Moocul.CG.ELv1_2.S20077.g00778 Moocul.CG.ELv1_2.S20077.g00779 Click to show this node (16_Ascidiacea) 16_Ascidiacea speciation node (click to collapse) Click to show this node (8_Stolidobranchia) 8_Stolidobranchia speciation node (click to collapse) Click to hide this line (7) 7 speciation node (click to collapse) 7 (~10 My ago) Click to hide this line (Boschl) Boschl terminal node Boschl - Chr:chrUn Boschl.CG.Botznik2013.chrUn.g09054 Boschl.CG.Botznik2013.chrUn.g09055 Boschl.CG.Botznik2013.chrUn.g09057 Boschl.CG.Botznik2013.chrUn.g09058 Boschl.CG.Botznik2013.chrUn.g09059 Boschl.CG.Botznik2013.chrUn.g09061 Boschl.CG.Botznik2013.chrUn.g09062 Boschl.CG.Botznik2013.chrUn.g09065 Boschl.CG.Botznik2013.chrUn.g09066 Boschl.CG.Botznik2013.chrUn.g09067 Boschl.CG.Botznik2013.chrUn.g09068 Boschl.CG.Botznik2013.chrUn.g09069 Boschl.CG.Botznik2013.chrUn.g09072 Boschl.CG.Botznik2013.chrUn.g09073 Boschl.CG.Botznik2013.chrUn.g09076 Boschl.CG.Botznik2013.chrUn.g09079 Boschl.CG.Botznik2013.chrUn.g09082 Boschl.CG.Botznik2013.chrUn.g09085 Boschl.CG.Botznik2013.chrUn.g09087 Boschl.CG.Botznik2013.chrUn.g09088 Boschl.CG.Botznik2013.chrUn.g09090 Boschl.CG.Botznik2013.chrUn.g09092 Boschl.CG.Botznik2013.chrUn.g09093 Boschl.CG.Botznik2013.chrUn.g09095 Boschl.CG.Botznik2013.chrUn.g09099 Boschl.CG.Botznik2013.chrUn.g09106 Boschl.CG.Botznik2013.chrUn.g09109 Boschl.CG.Botznik2013.chrUn.g09110 Boschl.CG.Botznik2013.chrUn.g09111 Boschl.CG.Botznik2013.chrUn.g09112 Click to hide this line (6_Halocynthia) 6_Halocynthia speciation node (click to collapse) 6_Halocynthia (~10 My ago) - block_402 Fam001869.C.d Fam005739.b.b Fam001974.D.b Fam001872.C Click to hide this line (Harore) Harore terminal node Harore - Chr:S439 Harore.CG.MTP2014.S439.g01855 Harore.CG.MTP2014.S439.g09641 Harore.CG.MTP2014.S439.g08626 Harore.CG.MTP2014.S439.g09812 Harore.CG.MTP2014.S439.g01165 Harore.CG.MTP2014.S439.g03746 Harore.CG.MTP2014.S439.g14193 Harore.CG.MTP2014.S439.g12695 Harore.CG.MTP2014.S439.g07163 Harore.CG.MTP2014.S439.g01113 Harore.CG.MTP2014.S439.g03233 Harore.CG.MTP2014.S439.g05367 Harore.CG.MTP2014.S439.g15323 Click to hide this line (Haaura) Haaura terminal node Haaura - Chr:S744 Haaura.CG.MTP2014.S744.g06503 Haaura.CG.MTP2014.S744.g06504 Haaura.CG.MTP2014.S744.g06505 Haaura.CG.MTP2014.S744.g06506 Haaura.CG.MTP2014.S744.g06508 Click to hide this line (26_Sarcopterygii) 26_Sarcopterygii speciation node (click to collapse) 26_Sarcopterygii (~10 My ago) Click to hide this line (Lcha) Lcha terminal node Lcha - Chr:JH128253.1 ENSLACG00000001107 ENSLACG00000004556 ENSLACG00000007706 ENSLACG00000008827 ENSLACG00000009516 Click to hide this line (25_Amniota) 25_Amniota speciation node (click to collapse) 25_Amniota (~10 My ago) Click to hide this line (24_Euarchontoglires) 24_Euarchontoglires speciation node (click to collapse) 24_Euarchontoglires (~10 My ago) - block_11 Fam006680 Fam009868.b.b.b.b.a.b.a.b Fam001861.U.d.b.a.b Fam001931.a Fam001917.D.b.b Fam001917.Y.a.a.a Fam001714.QB Fam005156.a Fam003473.b Fam006185.a.b.b Fam001836.L.b.b.a Fam004328.d.a.b Fam005566.a.a.b.b Fam002057.G Fam001764.A.a Fam001933.B.b.a.a.b.b Fam003156.F.a Fam005300.b Fam002833.B.a Fam005728.a.a Fam005728.b.b.b Fam002913.B.a Fam007093.b Fam002148.B.a.a.a Fam005507.a Fam004209.b.a.b Fam002429.A.b Fam003438.A Fam002555.G.b Fam005307.a Click to hide this line (Hsap) Hsap terminal node Hsap - Chr:2 ENSG00000197756 ENSG00000115457 ENSG00000115461 ENSG00000118245 ENSG00000278951 ENSG00000231672 ENSG00000079308 ENSG00000188282 ENSG00000180871 ENSG00000163464 ENSG00000163466 ENSG00000179921 ENSG00000127837 ENSG00000127838 ENSG00000135926 ENSG00000018280 ENSG00000144579 ENSG00000127831 ENSG00000135913 ENSG00000144580 ENSG00000115556 ENSG00000115568 ENSG00000074582 ENSG00000163481 ENSG00000163482 ENSG00000135912 ENSG00000135929 ENSG00000115592 ENSG00000115596 ENSG00000135925 Click to hide this line (Mmus) Mmus terminal node Mmus - Chr:1 ENSMUSG00000039354 ENSMUSG00000039342 ENSMUSG00000046330 ENSMUSG00000039323 ENSMUSG00000026185 ENSMUSG00000026182 ENSMUSG00000055322 ENSMUSG00000061815 ENSMUSG00000026180 ENSMUSG00000048480 ENSMUSG00000006304 ENSMUSG00000064272 ENSMUSG00000006299 ENSMUSG00000026179 ENSMUSG00000006301 ENSMUSG00000026177 ENSMUSG00000026176 ENSMUSG00000026175 ENSMUSG00000033364 ENSMUSG00000026174 ENSMUSG00000026173 ENSMUSG00000026135 ENSMUSG00000026172 ENSMUSG00000026171 ENSMUSG00000033276 ENSMUSG00000033257 ENSMUSG00000026170 ENSMUSG00000006542 ENSMUSG00000033227 ENSMUSG00000026167 Click to show this node (21_Archelosauria) 21_Archelosauria speciation node (click to collapse) Click to hide this line (Ggal) Ggal terminal node Ggal Click to show this node (28) 28 speciation node (click to collapse) Click to show this node (26_Sarcopterygii) 26_Sarcopterygii speciation node (click to collapse) Click to show this node (25_Amniota) 25_Amniota speciation node (click to collapse) Click to show this node (21_Archelosauria) 21_Archelosauria speciation node (click to collapse) Click to hide this line (Psin) Psin terminal node Psin - Chr:JH212850.1 ENSPSIG00000001005 ENSPSIG00000012212 ENSPSIG00000012506 ENSPSIG00000012980 ENSPSIG00000013276 ENSPSIG00000013321 ENSPSIG00000013670 ENSPSIG00000001013 ENSPSIG00000013750 ENSPSIG00000014238 Click to hide this line (Bbel) Bbel terminal node Bbel - scaffold235 120040R 120050F 120060R 120080F 120090R 120100F 120110F 120120R 120130R 120140F 120150R 120160F 120170R 120180F 120190R Click to show this node (33) 33 duplication node (click to collapse) Click to show this node (33) 33 speciation node (click to collapse) Click to show this node (Spur) Spur duplication node (click to collapse) Click to hide this line (Spur) Spur terminal node Spur - Chr:Scaffold183 SPU_002410 SPU_022368 SPU_023902 SPU_022365 SPU_022366 SPU_022367 SPU_027707 SPU_014261 SPU_014260 SPU_014430 SPU_004466 SPU_014003 SPU_014002 SPU_022010 SPU_022011 SPU_023453 SPU_023452 SPU_023454 SPU_030235 SPU_008569 SPU_018491 SPU_018492 SPU_018493 Click to hide this line (Spur) Spur terminal node Spur - Chr:Scaffold183 SPU_002410 SPU_022368 SPU_023902 SPU_022365 SPU_022366 SPU_022367 SPU_027707 SPU_014261 SPU_014260 SPU_014430 SPU_004466 SPU_014003 SPU_014002 SPU_022010 SPU_022011 SPU_023453 SPU_023452 SPU_023454 SPU_030235 SPU_008569 SPU_018491 SPU_018492 Click to hide this line (33) 33 speciation node (click to collapse) 33 (~10 My ago) Click to hide this line (Spur) Spur terminal node Spur - Chr:Scaffold183 SPU_002410 SPU_022368 SPU_023902 SPU_022365 SPU_022366 SPU_022367 SPU_027707 SPU_014261 SPU_014260 SPU_014430 SPU_004466 SPU_014003 SPU_014002 SPU_022010 SPU_022011 SPU_023453 SPU_023452 SPU_023454 SPU_030235 SPU_008569 SPU_018491 SPU_018492 SPU_018493 SPU_018490 Click to hide this line (Skow) Skow terminal node Skow - scaffold_31 Sakowv30045990m.g Sakowv30046010m.g Sakowv30046086m.g Sakowv30046088m.g Sakowv30045988m.g Sakowv30046090m.g Sakowv30046093m.g Sakowv30046041m.g Sakowv30046081m.g Sakowv30046030m.g Sakowv30046079m.g Sakowv30046012m.g Sakowv30046068m.g Sakowv30046060m.g Sakowv30046051m.g Sakowv30046073m.g Sakowv30046043m.g Sakowv30046085m.g Sakowv30046018m.g Sakowv30046008m.g Fam012521 Phfumi.CG.MTP2014.S1067.g03194 Phmamm.CG.MTP2014.S448.g08864 Fam003398 Fam003398 Fam003398.b Fam003398.b.b Fam003398.b.b Fam003398.b.b Phfumi.CG.MTP2014.S1067.g03195 Phmamm.CG.MTP2014.S104.g03262 Phmamm.CG.MTP2014.S448.g08866 Fam003398.b.b KH2012:KH.C1.1131 Cisavi.CG.ENS81.R62.512567-514251 (ENSCSAVG00000002244) Fam003398.b.b Moocci.CG.ELv1_2.S603940.g24930 Moocul.CG.ELv1_2.S20077.g00775 Fam003398.b ENSLACG00000009008 Fam003398.b Fam003398.b ENSG00000158428 ENSMUSG00000073650 ENSGALP00000028630 120070F SPU_009170 SPU_009169 SPU_014431 SPU_009170 SPU_009169 SPU_014431 Fam003398.d SPU_009170 SPU_009169 SPU_014431 Sakowv30046019m.g Fam003398.b.a Boschl.CG.Botznik2013.chrUn.g09077 Fam003398.b.a Harore.CG.MTP2014.S439.g03858 Haaura.CG.MTP2014.S744.g06507 ENSPSIG00000014071