Reference Gene Name: Cisavi.CG.ENS81.R72.1095865-1099287 (ENSCSAVG00000005323) Ensembl
Reference Species : Cisavi
Root Species : 34_Deuterostomia (~10 million years) 		34_Deuterostomia Link Wikipedia to Cisavi Link Ensembl
×2 ÷2 Center the view on the reference gene Shift 1 gene on the left Shift 5 genes on the left Shift 1 gene on the right Shift 5 genes on the right Zoom out Show 1 less gene on each side Show 1 more gene on each side Show half the number of genes on each side Show twice more genes on each side Zoom in
Schematic scale
Genomic scale
dN/dS Ratio
Protein Similarity
CNE Track
34_Deuterostomia speciation node (click to collapse) 34_Deuterostomia (~10 My ago) Click to show this node (30_Chordata) 30_Chordata duplication node (click to collapse) Click to show this node (30_Chordata) 30_Chordata speciation node (click to collapse) Click to show this node (28) 28 speciation node (click to collapse) Click to hide this line (16_Ascidiacea) 16_Ascidiacea speciation node (click to collapse) 16_Ascidiacea (~10 My ago) - block_356 Fam007897 Click to show this node (15_Phlebobranchia) 15_Phlebobranchia duplication node (click to collapse) Click to show this node (15_Phlebobranchia) 15_Phlebobranchia duplication node (click to collapse) Click to show this node (15_Phlebobranchia) 15_Phlebobranchia duplication node (click to collapse) Click to show this node (15_Phlebobranchia) 15_Phlebobranchia duplication node (click to collapse) Click to show this node (15_Phlebobranchia) 15_Phlebobranchia duplication node (click to collapse) Click to hide this line (15_Phlebobranchia) 15_Phlebobranchia speciation node (click to collapse) 15_Phlebobranchia (~10 My ago) Click to show this node (11_Ciona) 11_Ciona duplication node (click to collapse) Click to show this node (11_Ciona) 11_Ciona duplication node (click to collapse) Click to hide this line (11_Ciona) 11_Ciona speciation node (click to collapse) 11_Ciona (~10 My ago) Click to hide this line (Cisavi) Cisavi duplication node (click to collapse) Cisavi Click to hide this line (Cisavi) Cisavi duplication node (click to collapse) Cisavi Click to hide this line (Cisavi) Cisavi duplication node (click to collapse) Cisavi Click to hide this line (Cisavi) Cisavi terminal node Cisavi - Chr:reftig_72 Click to hide this line (Cisavi) Cisavi terminal node Cisavi - Chr:reftig_72 Cisavi.CG.ENS81.R72.615906-626767 (ENSCSAVG00000004841) Cisavi.CG.ENS81.R72.629810-634725 (ENSCSAVG00000004845) Cisavi.CG.ENS81.R72.646310-673288 (ENSCSAVG00000004847) Click to hide this line (Cisavi) Cisavi terminal node Cisavi - Chr:reftig_132 Cisavi.CG.ENS81.R132.408651-419710 (ENSCSAVG00000003658) Cisavi.CG.ENS81.R132.426549-463237 (ENSCSAVG00000003666) Cisavi.CG.ENS81.R132.470177-476303 (ENSCSAVG00000003859) Cisavi.CG.ENS81.R132.498937-520048 (ENSCSAVG00000003870) Cisavi.CG.ENS81.R132.522064-529972 (ENSCSAVG00000004352) Cisavi.CG.ENS81.R132.588817-589893 (ENSCSAVG00000004357) Cisavi.CG.ENS81.R132.609310-615961 (ENSCSAVG00000004367) Cisavi.CG.ENS81.R132.641323-652909 (ENSCSAVG00000004509) Cisavi.CG.ENS81.R132.654878-662436 (ENSCSAVG00000004515) Cisavi.CG.ENS81.R132.671158-674092 (ENSCSAVG00000004566) Cisavi.CG.ENS81.R132.683492-711253 (ENSCSAVG00000004574) Cisavi.CG.ENS81.R132.734198-743807 (ENSCSAVG00000004675) Cisavi.CG.ENS81.R132.830150-832642 (ENSCSAVG00000004868) Cisavi.CG.ENS81.R132.840674-841529 (ENSCSAVG00000004880) Cisavi.CG.ENS81.R132.868342-870418 (ENSCSAVG00000004886) Cisavi.CG.ENS81.R132.873673-877118 (ENSCSAVG00000004908) Cisavi.CG.ENS81.R132.883462-885726 (ENSCSAVG00000004924) Cisavi.CG.ENS81.R132.886204-888886 (ENSCSAVG00000004929) Cisavi.CG.ENS81.R132.890453-893893 (ENSCSAVG00000004960) Cisavi.CG.ENS81.R132.894052-896377 (ENSCSAVG00000004965) Cisavi.CG.ENS81.R132.900019-905953 (ENSCSAVG00000004968) Cisavi.CG.ENS81.R132.907735-927859 (ENSCSAVG00000004976) Cisavi.CG.ENS81.R132.932184-935756 (ENSCSAVG00000005175) Cisavi.CG.ENS81.R132.942263-943768 (ENSCSAVG00000005181) Cisavi.CG.ENS81.R132.944579-947908 (ENSCSAVG00000005182) Cisavi.CG.ENS81.R132.1012908-1015080 (ENSCSAVG00000005204) Cisavi.CG.ENS81.R132.1026008-1068611 (ENSCSAVG00000005208) Cisavi.CG.ENS81.R132.1026136-1026761 (ENSCSAVG00000005233) Cisavi.CG.ENS81.R132.1070659-1073898 (ENSCSAVG00000005234) Click to hide this line (Cisavi) Cisavi terminal node Cisavi - Chr:reftig_132 Cisavi.CG.ENS81.R132.370900-375640 (ENSCSAVG00000003635) Cisavi.CG.ENS81.R132.385715-399387 (ENSCSAVG00000003640) Cisavi.CG.ENS81.R132.400734-403984 (ENSCSAVG00000003644) Cisavi.CG.ENS81.R132.408651-419710 (ENSCSAVG00000003658) Cisavi.CG.ENS81.R132.426549-463237 (ENSCSAVG00000003666) Cisavi.CG.ENS81.R132.470177-476303 (ENSCSAVG00000003859) Cisavi.CG.ENS81.R132.498937-520048 (ENSCSAVG00000003870) Cisavi.CG.ENS81.R132.522064-529972 (ENSCSAVG00000004352) Cisavi.CG.ENS81.R132.588817-589893 (ENSCSAVG00000004357) Cisavi.CG.ENS81.R132.609310-615961 (ENSCSAVG00000004367) Cisavi.CG.ENS81.R132.641323-652909 (ENSCSAVG00000004509) Cisavi.CG.ENS81.R132.654878-662436 (ENSCSAVG00000004515) Cisavi.CG.ENS81.R132.671158-674092 (ENSCSAVG00000004566) Cisavi.CG.ENS81.R132.683492-711253 (ENSCSAVG00000004574) Cisavi.CG.ENS81.R132.734198-743807 (ENSCSAVG00000004675) Cisavi.CG.ENS81.R132.830150-832642 (ENSCSAVG00000004868) Cisavi.CG.ENS81.R132.840674-841529 (ENSCSAVG00000004880) Cisavi.CG.ENS81.R132.868342-870418 (ENSCSAVG00000004886) Cisavi.CG.ENS81.R132.873673-877118 (ENSCSAVG00000004908) Cisavi.CG.ENS81.R132.883462-885726 (ENSCSAVG00000004924) Cisavi.CG.ENS81.R132.886204-888886 (ENSCSAVG00000004929) Cisavi.CG.ENS81.R132.890453-893893 (ENSCSAVG00000004960) Cisavi.CG.ENS81.R132.894052-896377 (ENSCSAVG00000004965) Cisavi.CG.ENS81.R132.900019-905953 (ENSCSAVG00000004968) Cisavi.CG.ENS81.R132.907735-927859 (ENSCSAVG00000004976) Cisavi.CG.ENS81.R132.932184-935756 (ENSCSAVG00000005175) Cisavi.CG.ENS81.R132.942263-943768 (ENSCSAVG00000005181) Cisavi.CG.ENS81.R132.944579-947908 (ENSCSAVG00000005182) Cisavi.CG.ENS81.R132.1012908-1015080 (ENSCSAVG00000005204) Click to hide this line (Cirobu) Cirobu terminal node Cirobu - Chr:KhC9 KH2012:KH.C9.677 KH2012:KH.C9.247 KH2012:KH.C9.439 KH2012:KH.C9.332 KH2012:KH.C9.388 KH2012:KH.C9.863 KH2012:KH.C9.859 KH2012:KH.C9.460 KH2012:KH.C9.113 KH2012:KH.C9.274 KH2012:KH.C9.627 KH2012:KH.C9.794 KH2012:KH.C9.511 KH2012:KH.C9.200 KH2012:KH.C9.76 KH2012:KH.C9.233 KH2012:KH.C9.532 KH2012:KH.C9.593 KH2012:KH.C9.153 KH2012:KH.C9.293 KH2012:KH.C9.86 KH2012:KH.C9.784 KH2012:KH.C9.849 KH2012:KH.C9.513 KH2012:KH.C9.447 KH2012:KH.C9.108 KH2012:KH.C9.686 KH2012:KH.C9.795 KH2012:KH.C9.338 KH2012:KH.C9.143 Click to show this node (11_Ciona) 11_Ciona duplication node (click to collapse) Click to show this node (11_Ciona) 11_Ciona speciation node (click to collapse) Click to hide this line (Cisavi) Cisavi terminal node Cisavi - Chr:reftig_24 Cisavi.CG.ENS81.R24.889650-893452 (ENSCSAVG00000007581) Cisavi.CG.ENS81.R24.903106-907964 (ENSCSAVG00000007587) Cisavi.CG.ENS81.R24.909221-915181 (ENSCSAVG00000007783) Cisavi.CG.ENS81.R24.923321-925345 (ENSCSAVG00000007830) Cisavi.CG.ENS81.R24.949418-955803 (ENSCSAVG00000007832) Cisavi.CG.ENS81.R24.975444-986381 (ENSCSAVG00000007839) Cisavi.CG.ENS81.R24.992055-993007 (ENSCSAVG00000007842) Cisavi.CG.ENS81.R24.999187-1011497 (ENSCSAVG00000007846) Cisavi.CG.ENS81.R24.1021153-1022445 (ENSCSAVG00000007858) Cisavi.CG.ENS81.R24.1023181-1025317 (ENSCSAVG00000007860) Cisavi.CG.ENS81.R24.1027198-1030497 (ENSCSAVG00000007862) Cisavi.CG.ENS81.R24.1033179-1038589 (ENSCSAVG00000007934) Cisavi.CG.ENS81.R24.1049814-1074066 (ENSCSAVG00000007941) Cisavi.CG.ENS81.R24.1073965-1075144 (ENSCSAVG00000008454) Cisavi.CG.ENS81.R24.1076112-1077063 (ENSCSAVG00000008455) Cisavi.CG.ENS81.R24.1090757-1091842 (ENSCSAVG00000008459) Cisavi.CG.ENS81.R24.1098304-1103106 (ENSCSAVG00000008460) Cisavi.CG.ENS81.R24.1104270-1107938 (ENSCSAVG00000008463) Cisavi.CG.ENS81.R24.1108368-1109316 (ENSCSAVG00000008464) Click to show this node (11_Ciona) 11_Ciona duplication node (click to collapse) Click to show this node (11_Ciona) 11_Ciona speciation node (click to collapse) Click to hide this line (Cirobu) Cirobu terminal node Cirobu - Chr:KhC2 KH2012:KH.C2.128 KH2012:KH.C2.988 KH2012:KH.C2.66 KH2012:KH.C2.891 KH2012:KH.C2.72 KH2012:KH.C2.498 KH2012:KH.C2.781 KH2012:KH.C2.473 KH2012:KH.C2.546 KH2012:KH.C2.898 KH2012:KH.C2.303 KH2012:KH.C2.875 KH2012:KH.C2.1044 KH2012:KH.C2.85 KH2012:KH.C2.632 KH2012:KH.C2.610 KH2012:KH.C2.752 KH2012:KH.C2.877 KH2012:KH.C2.346 KH2012:KH.C2.209 KH2012:KH.C2.938 KH2012:KH.C2.944 KH2012:KH.C2.309 KH2012:KH.C2.302 KH2012:KH.C2.1005 KH2012:KH.C2.509 KH2012:KH.C2.1100 KH2012:KH.C2.719 KH2012:KH.C2.168 KH2012:KH.C2.656 Click to show this node (11_Ciona) 11_Ciona duplication node (click to collapse) Click to show this node (11_Ciona) 11_Ciona duplication node (click to collapse) Click to show this node (11_Ciona) 11_Ciona speciation node (click to collapse) Click to hide this line (Cisavi) Cisavi terminal node Cisavi - Chr:reftig_156 Cisavi.CG.ENS81.R156.280614-299901 (ENSCSAVG00000008624) Cisavi.CG.ENS81.R156.301176-305013 (ENSCSAVG00000008777) Cisavi.CG.ENS81.R156.313144-317027 (ENSCSAVG00000008778) Cisavi.CG.ENS81.R156.326718-335138 (ENSCSAVG00000008782) Cisavi.CG.ENS81.R156.349888-357454 (ENSCSAVG00000008830) Cisavi.CG.ENS81.R156.358167-359072 (ENSCSAVG00000008964) Cisavi.CG.ENS81.R156.361755-365125 (ENSCSAVG00000008966) Cisavi.CG.ENS81.R156.366288-367774 (ENSCSAVG00000008969) Cisavi.CG.ENS81.R156.374311-380085 (ENSCSAVG00000008972) Cisavi.CG.ENS81.R156.381415-383346 (ENSCSAVG00000009023) Cisavi.CG.ENS81.R156.382181-382461 (ENSCSAVG00000009026) Cisavi.CG.ENS81.R156.400800-408703 (ENSCSAVG00000009027) Cisavi.CG.ENS81.R156.461386-466575 (ENSCSAVG00000009033) Cisavi.CG.ENS81.R156.471155-487263 (ENSCSAVG00000009036) Cisavi.CG.ENS81.R156.487664-488800 (ENSCSAVG00000009338) Cisavi.CG.ENS81.R156.504717-505896 (ENSCSAVG00000009343) Cisavi.CG.ENS81.R156.520844-525418 (ENSCSAVG00000009345) Cisavi.CG.ENS81.R156.610710-623806 (ENSCSAVG00000009349) Cisavi.CG.ENS81.R156.625954-628869 (ENSCSAVG00000009447) Cisavi.CG.ENS81.R156.634942-646324 (ENSCSAVG00000009467) Cisavi.CG.ENS81.R156.646849-647718 (ENSCSAVG00000009508) Cisavi.CG.ENS81.R156.884355-887966 (ENSCSAVG00000009510) Cisavi.CG.ENS81.R156.892351-898886 (ENSCSAVG00000009513) Cisavi.CG.ENS81.R156.905235-910821 (ENSCSAVG00000009599) Cisavi.CG.ENS81.R156.943953-946230 (ENSCSAVG00000009607) Cisavi.CG.ENS81.R156.955431-960773 (ENSCSAVG00000009611) Cisavi.CG.ENS81.R156.965382-972099 (ENSCSAVG00000009639) Cisavi.CG.ENS81.R156.980895-989470 (ENSCSAVG00000009646) Cisavi.CG.ENS81.R156.993859-997623 (ENSCSAVG00000009654) Cisavi.CG.ENS81.R156.1005416-1006384 (ENSCSAVG00000009656) Click to hide this line (11_Ciona) 11_Ciona speciation node (click to collapse) 11_Ciona (~10 My ago) Click to hide this line (Cisavi) Cisavi duplication node (click to collapse) Cisavi Click to hide this line (Cisavi) Cisavi duplication node (click to collapse) Cisavi Click to hide this line (Cisavi) Cisavi terminal node Cisavi - Chr:reftig_91 Cisavi.CG.ENS81.R91.828462-829981 (ENSCSAVG00000001017) Cisavi.CG.ENS81.R91.844063-851201 (ENSCSAVG00000001019) Cisavi.CG.ENS81.R91.854336-860680 (ENSCSAVG00000001021) Cisavi.CG.ENS81.R91.875038-880654 (ENSCSAVG00000001023) Cisavi.CG.ENS81.R91.926585-934065 (ENSCSAVG00000001067) Cisavi.CG.ENS81.R91.998943-1003033 (ENSCSAVG00000001074) Cisavi.CG.ENS81.R91.1019997-1033412 (ENSCSAVG00000001078) Cisavi.CG.ENS81.R91.1034250-1035020 (ENSCSAVG00000001100) Cisavi.CG.ENS81.R91.1066260-1115022 (ENSCSAVG00000001103) Cisavi.CG.ENS81.R91.1103258-1105734 (ENSCSAVG00000001145) Cisavi.CG.ENS81.R91.1121805-1126932 (ENSCSAVG00000001199) Cisavi.CG.ENS81.R91.1154154-1158055 (ENSCSAVG00000001201) Cisavi.CG.ENS81.R91.1158867-1165840 (ENSCSAVG00000001206) Cisavi.CG.ENS81.R91.1166333-1168783 (ENSCSAVG00000001212) Cisavi.CG.ENS81.R91.1190328-1195224 (ENSCSAVG00000001213) Cisavi.CG.ENS81.R91.1264886-1277611 (ENSCSAVG00000001240) Cisavi.CG.ENS81.R91.1278555-1281535 (ENSCSAVG00000001284) Cisavi.CG.ENS81.R91.1282420-1292579 (ENSCSAVG00000001289) Cisavi.CG.ENS81.R91.1306181-1308958 (ENSCSAVG00000001292) Cisavi.CG.ENS81.R91.1317407-1321428 (ENSCSAVG00000001293) Cisavi.CG.ENS81.R91.1322779-1329869 (ENSCSAVG00000001334) Cisavi.CG.ENS81.R91.1333441-1347782 (ENSCSAVG00000001337) Cisavi.CG.ENS81.R91.1391828-1394717 (ENSCSAVG00000001340) Cisavi.CG.ENS81.R91.1405747-1406652 (ENSCSAVG00000001342) Cisavi.CG.ENS81.R91.1405803-1407213 (ENSCSAVG00000001343) Cisavi.CG.ENS81.R91.1440939-1441545 (ENSCSAVG00000001346) Cisavi.CG.ENS81.R91.1509669-1511723 (ENSCSAVG00000001350) Cisavi.CG.ENS81.R91.1516044-1521222 (ENSCSAVG00000001381) Click to hide this line (Cisavi) Cisavi terminal node Cisavi - Chr:reftig_509 Cisavi.CG.ENS81.R509.70-10758 (ENSCSAVG00000002900) Cisavi.CG.ENS81.R509.24157-26275 (ENSCSAVG00000003031) Cisavi.CG.ENS81.R509.27996-29186 (ENSCSAVG00000003037) Cisavi.CG.ENS81.R509.34460-41157 (ENSCSAVG00000003044) Cisavi.CG.ENS81.R509.44853-53659 (ENSCSAVG00000003111) Cisavi.CG.ENS81.R509.54757-55367 (ENSCSAVG00000003164) Cisavi.CG.ENS81.R509.55415-57038 (ENSCSAVG00000003165) Cisavi.CG.ENS81.R509.57133-60535 (ENSCSAVG00000003166) Click to hide this line (Cisavi) Cisavi terminal node Cisavi - Chr:reftig_65 Cisavi.CG.ENS81.R65.105970-109715 (ENSCSAVG00000004332) Cisavi.CG.ENS81.R65.112742-118333 (ENSCSAVG00000004336) Cisavi.CG.ENS81.R65.148943-163779 (ENSCSAVG00000004341) Cisavi.CG.ENS81.R65.162879-165682 (ENSCSAVG00000004446) Cisavi.CG.ENS81.R65.165191-172447 (ENSCSAVG00000004452) Cisavi.CG.ENS81.R65.214277-214729 (ENSCSAVG00000004533) Cisavi.CG.ENS81.R65.215829-227021 (ENSCSAVG00000004538) Cisavi.CG.ENS81.R65.228751-233434 (ENSCSAVG00000004550) Cisavi.CG.ENS81.R65.238341-241916 (ENSCSAVG00000004554) Cisavi.CG.ENS81.R65.243452-262276 (ENSCSAVG00000004560) Cisavi.CG.ENS81.R65.287330-315645 (ENSCSAVG00000004623) Cisavi.CG.ENS81.R65.317866-336698 (ENSCSAVG00000004631) Cisavi.CG.ENS81.R65.368155-376728 (ENSCSAVG00000004769) Cisavi.CG.ENS81.R65.379296-394023 (ENSCSAVG00000004986) Cisavi.CG.ENS81.R65.406023-419697 (ENSCSAVG00000004992) Cisavi.CG.ENS81.R65.425548-434983 (ENSCSAVG00000005003) Cisavi.CG.ENS81.R65.442178-445082 (ENSCSAVG00000005015) Cisavi.CG.ENS81.R65.450721-456943 (ENSCSAVG00000005020) Cisavi.CG.ENS81.R65.460271-470000 (ENSCSAVG00000005024) Cisavi.CG.ENS81.R65.470105-486061 (ENSCSAVG00000005137) Click to show this node (Cirobu) Cirobu duplication node (click to collapse) Click to hide this line (Cirobu) Cirobu terminal node Cirobu - Chr:KhC3 KH2012:KH.C3.297 KH2012:KH.C3.659 KH2012:KH.C3.285 KH2012:KH.C3.842 KH2012:KH.C3.256 KH2012:KH.C3.775 KH2012:KH.C3.465 KH2012:KH.C3.582 KH2012:KH.C3.692 KH2012:KH.C3.164 KH2012:KH.C3.44 KH2012:KH.C3.209 KH2012:KH.C3.34 KH2012:KH.C3.447 KH2012:KH.C3.110 KH2012:KH.C3.634 KH2012:KH.C3.172 KH2012:KH.C3.383 KH2012:KH.C3.60 KH2012:KH.C3.647 KH2012:KH.C3.602 KH2012:KH.C3.101 KH2012:KH.C3.903 KH2012:KH.C3.565 KH2012:KH.C3.160 KH2012:KH.C3.919 KH2012:KH.C3.440 KH2012:KH.C3.365 KH2012:KH.C3.59 KH2012:KH.C3.175 Click to hide this line (Cirobu) Cirobu terminal node Cirobu - Chr:KhS562 KH2012:KH.S562.7 KH2012:KH.S562.3 KH2012:KH.S562.8 KH2012:KH.S562.1 KH2012:KH.S562.6 KH2012:KH.S562.2 KH2012:KH.S562.4 Click to show this node (11_Ciona) 11_Ciona speciation node (click to collapse) Click to hide this line (Cisavi) Cisavi terminal node Cisavi - Chr:reftig_54 Cisavi.CG.ENS81.R54.755874-757277 (ENSCSAVG00000007066) Cisavi.CG.ENS81.R54.759060-762211 (ENSCSAVG00000007068) Cisavi.CG.ENS81.R54.814453-817823 (ENSCSAVG00000007073) Cisavi.CG.ENS81.R54.818424-828304 (ENSCSAVG00000007076) Cisavi.CG.ENS81.R54.830341-833155 (ENSCSAVG00000007114) Cisavi.CG.ENS81.R54.833623-835495 (ENSCSAVG00000007117) Cisavi.CG.ENS81.R54.835996-843399 (ENSCSAVG00000007119) Cisavi.CG.ENS81.R54.844603-846336 (ENSCSAVG00000007123) Cisavi.CG.ENS81.R54.846346-847559 (ENSCSAVG00000007141) Cisavi.CG.ENS81.R54.847805-848763 (ENSCSAVG00000007144) Cisavi.CG.ENS81.R54.851708-858193 (ENSCSAVG00000007188) Cisavi.CG.ENS81.R54.866441-868987 (ENSCSAVG00000007189) Cisavi.CG.ENS81.R54.876582-880894 (ENSCSAVG00000007190) Cisavi.CG.ENS81.R54.881324-888249 (ENSCSAVG00000007196) Cisavi.CG.ENS81.R54.908745-909729 (ENSCSAVG00000007211) Cisavi.CG.ENS81.R54.974220-975203 (ENSCSAVG00000007219) Cisavi.CG.ENS81.R54.977894-979963 (ENSCSAVG00000007223) Cisavi.CG.ENS81.R54.991634-995291 (ENSCSAVG00000007225) Cisavi.CG.ENS81.R54.995822-998283 (ENSCSAVG00000007231) Cisavi.CG.ENS81.R54.998342-1009813 (ENSCSAVG00000007237) Cisavi.CG.ENS81.R54.1031532-1044399 (ENSCSAVG00000007607) Cisavi.CG.ENS81.R54.1045780-1071370 (ENSCSAVG00000007670) Cisavi.CG.ENS81.R54.1087197-1094751 (ENSCSAVG00000007960) Cisavi.CG.ENS81.R54.1101851-1105010 (ENSCSAVG00000007963) Cisavi.CG.ENS81.R54.1109228-1114799 (ENSCSAVG00000007966) Cisavi.CG.ENS81.R54.1115686-1118672 (ENSCSAVG00000007975) Cisavi.CG.ENS81.R54.1121973-1125848 (ENSCSAVG00000008039) Cisavi.CG.ENS81.R54.1137479-1140181 (ENSCSAVG00000008052) Cisavi.CG.ENS81.R54.1149239-1152356 (ENSCSAVG00000008057) Cisavi.CG.ENS81.R54.1164605-1167999 (ENSCSAVG00000008060) Click to show this node (11_Ciona) 11_Ciona speciation node (click to collapse) Click to show this node (Cirobu) Cirobu duplication node (click to collapse) Click to show this node (Cirobu) Cirobu duplication node (click to collapse) Click to hide this line (Cirobu) Cirobu terminal node Cirobu - Chr:KhC5 KH2012:KH.C5.262 KH2012:KH.C5.50 KH2012:KH.C5.408 KH2012:KH.C5.261 KH2012:KH.C5.220 KH2012:KH.C5.507 KH2012:KH.C5.396 KH2012:KH.C5.113 KH2012:KH.C5.304 KH2012:KH.C5.534 KH2012:KH.C5.218 KH2012:KH.C5.189 KH2012:KH.C5.4 KH2012:KH.C5.167 KH2012:KH.C5.427 KH2012:KH.C5.71 KH2012:KH.C5.664 KH2012:KH.C5.23 KH2012:KH.C5.117 KH2012:KH.C5.258 KH2012:KH.C5.320 KH2012:KH.C5.130 KH2012:KH.C5.42 KH2012:KH.C5.95 KH2012:KH.C5.413 KH2012:KH.C5.453 KH2012:KH.C5.77 KH2012:KH.C5.26 KH2012:KH.C5.527 Click to hide this line (Cirobu) Cirobu terminal node Cirobu - Chr:KhC5 KH2012:KH.C5.194 KH2012:KH.C5.262 KH2012:KH.C5.50 KH2012:KH.C5.408 KH2012:KH.C5.261 KH2012:KH.C5.220 KH2012:KH.C5.507 KH2012:KH.C5.396 KH2012:KH.C5.113 KH2012:KH.C5.304 KH2012:KH.C5.534 KH2012:KH.C5.218 KH2012:KH.C5.189 KH2012:KH.C5.4 KH2012:KH.C5.167 KH2012:KH.C5.427 KH2012:KH.C5.71 KH2012:KH.C5.664 KH2012:KH.C5.23 KH2012:KH.C5.117 KH2012:KH.C5.258 KH2012:KH.C5.320 KH2012:KH.C5.130 KH2012:KH.C5.42 KH2012:KH.C5.95 KH2012:KH.C5.413 KH2012:KH.C5.453 KH2012:KH.C5.77 KH2012:KH.C5.26 Click to hide this line (Cirobu) Cirobu terminal node Cirobu - Chr:KhC11 KH2012:KH.C11.41 KH2012:KH.C11.263 KH2012:KH.C11.338 KH2012:KH.C11.70 KH2012:KH.C11.284 KH2012:KH.C11.162 KH2012:KH.C11.639 KH2012:KH.C11.581 KH2012:KH.C11.280 KH2012:KH.C11.405 KH2012:KH.C11.144 KH2012:KH.C11.632 KH2012:KH.C11.680 KH2012:KH.C11.568 KH2012:KH.C11.150 KH2012:KH.C11.481 KH2012:KH.C11.454 KH2012:KH.C11.195 KH2012:KH.C11.700 KH2012:KH.C11.412 KH2012:KH.C11.368 KH2012:KH.C11.321 KH2012:KH.C11.72 KH2012:KH.C11.490 KH2012:KH.C11.483 KH2012:KH.C11.145 KH2012:KH.C11.460 KH2012:KH.C11.45 KH2012:KH.C11.485 KH2012:KH.C11.629 Click to show this node (14_Phallusia) 14_Phallusia speciation node (click to collapse) Click to hide this line (Phmamm) Phmamm terminal node Phmamm - Chr:S167 Phmamm.CG.MTP2014.S167.g04597 Phmamm.CG.MTP2014.S167.g04598 Phmamm.CG.MTP2014.S167.g04599 Phmamm.CG.MTP2014.S167.g04600 Phmamm.CG.MTP2014.S167.g04601 Phmamm.CG.MTP2014.S167.g04602 Phmamm.CG.MTP2014.S167.g04603 Phmamm.CG.MTP2014.S167.g04604 Phmamm.CG.MTP2014.S167.g04605 Phmamm.CG.MTP2014.S167.g04606 Phmamm.CG.MTP2014.S167.g04607 Phmamm.CG.MTP2014.S167.g04608 Phmamm.CG.MTP2014.S167.g04609 Phmamm.CG.MTP2014.S167.g04610 Phmamm.CG.MTP2014.S167.g04612 Phmamm.CG.MTP2014.S167.g04613 Phmamm.CG.MTP2014.S167.g04614 Phmamm.CG.MTP2014.S167.g04615 Phmamm.CG.MTP2014.S167.g04616 Phmamm.CG.MTP2014.S167.g04617 Phmamm.CG.MTP2014.S167.g04618 Click to show this node (15_Phlebobranchia) 15_Phlebobranchia speciation node (click to collapse) Click to show this node (11_Ciona) 11_Ciona speciation node (click to collapse) Click to hide this line (Cisavi) Cisavi terminal node Cisavi - Chr:reftig_151 Cisavi.CG.ENS81.R151.1096-19315 (ENSCSAVG00000001964) Cisavi.CG.ENS81.R151.42869-54221 (ENSCSAVG00000002038) Cisavi.CG.ENS81.R151.48899-53718 (ENSCSAVG00000002041) Cisavi.CG.ENS81.R151.63955-69324 (ENSCSAVG00000002042) Cisavi.CG.ENS81.R151.78645-79588 (ENSCSAVG00000002051) Cisavi.CG.ENS81.R151.82357-84099 (ENSCSAVG00000002053) Cisavi.CG.ENS81.R151.88705-92195 (ENSCSAVG00000002058) Cisavi.CG.ENS81.R151.92162-97104 (ENSCSAVG00000002069) Cisavi.CG.ENS81.R151.104815-106074 (ENSCSAVG00000002442) Cisavi.CG.ENS81.R151.109573-115765 (ENSCSAVG00000002450) Cisavi.CG.ENS81.R151.119452-120677 (ENSCSAVG00000002454) Cisavi.CG.ENS81.R151.123499-124836 (ENSCSAVG00000002459) Cisavi.CG.ENS81.R151.129671-130910 (ENSCSAVG00000002465) Cisavi.CG.ENS81.R151.149535-151774 (ENSCSAVG00000002470) Cisavi.CG.ENS81.R151.172463-177850 (ENSCSAVG00000002480) Cisavi.CG.ENS81.R151.179129-181145 (ENSCSAVG00000002802) Cisavi.CG.ENS81.R151.193928-199845 (ENSCSAVG00000002820) Cisavi.CG.ENS81.R151.201717-203186 (ENSCSAVG00000003436) Cisavi.CG.ENS81.R151.205775-206122 (ENSCSAVG00000003447) Cisavi.CG.ENS81.R151.208105-213651 (ENSCSAVG00000003449) Cisavi.CG.ENS81.R151.214879-221728 (ENSCSAVG00000003678) Cisavi.CG.ENS81.R151.226639-231033 (ENSCSAVG00000003685) Cisavi.CG.ENS81.R151.250388-252218 (ENSCSAVG00000003689) Cisavi.CG.ENS81.R151.317596-335494 (ENSCSAVG00000003692) Cisavi.CG.ENS81.R151.338088-349112 (ENSCSAVG00000003706) Cisavi.CG.ENS81.R151.349735-350850 (ENSCSAVG00000003809) Cisavi.CG.ENS81.R151.358355-359539 (ENSCSAVG00000003817) Cisavi.CG.ENS81.R151.371342-372135 (ENSCSAVG00000003819) Cisavi.CG.ENS81.R151.394761-402522 (ENSCSAVG00000003823) Click to show this node (15_Phlebobranchia) 15_Phlebobranchia speciation node (click to collapse) Click to show this node (11_Ciona) 11_Ciona speciation node (click to collapse) Click to hide this line (Cirobu) Cirobu terminal node Cirobu - Chr:KhL96 KH2012:KH.L96.24 KH2012:KH.L96.89 KH2012:KH.L96.55 KH2012:KH.L96.12 KH2012:KH.L96.87 KH2012:KH.L96.40 KH2012:KH.L96.27 KH2012:KH.L96.39 KH2012:KH.L96.38 KH2012:KH.L96.33 KH2012:KH.L96.1 KH2012:KH.L96.101 KH2012:KH.L96.7 KH2012:KH.L96.2 KH2012:KH.L96.18 KH2012:KH.L96.70 KH2012:KH.L96.92 KH2012:KH.L96.10 KH2012:KH.L96.14 KH2012:KH.L96.86 KH2012:KH.L96.20 KH2012:KH.L96.84 KH2012:KH.L96.28 KH2012:KH.L96.113 KH2012:KH.L96.71 KH2012:KH.L96.50 KH2012:KH.L96.95 KH2012:KH.L96.8 KH2012:KH.L96.109 Click to show this node (15_Phlebobranchia) 15_Phlebobranchia speciation node (click to collapse) Click to show this node (11_Ciona) 11_Ciona speciation node (click to collapse) Click to hide this line (Cirobu) Cirobu terminal node Cirobu - Chr:KhC2 KH2012:KH.C2.43 KH2012:KH.C2.575 KH2012:KH.C2.291 KH2012:KH.C2.921 KH2012:KH.C2.534 KH2012:KH.C2.803 KH2012:KH.C2.638 KH2012:KH.C2.737 KH2012:KH.C2.144 KH2012:KH.C2.1126 KH2012:KH.C2.688 KH2012:KH.C2.45 KH2012:KH.C2.615 KH2012:KH.C2.405 KH2012:KH.C2.716 KH2012:KH.C2.619 KH2012:KH.C2.1056 KH2012:KH.C2.601 KH2012:KH.C2.664 KH2012:KH.C2.42 KH2012:KH.C2.743 KH2012:KH.C2.162 KH2012:KH.C2.235 KH2012:KH.C2.806 KH2012:KH.C2.645 KH2012:KH.C2.194 KH2012:KH.C2.121 KH2012:KH.C2.1019 KH2012:KH.C2.980 KH2012:KH.C2.949 Click to show this node (15_Phlebobranchia) 15_Phlebobranchia speciation node (click to collapse) Click to show this node (11_Ciona) 11_Ciona speciation node (click to collapse) Click to hide this line (Cirobu) Cirobu terminal node Cirobu - Chr:KhC11 KH2012:KH.C11.328 KH2012:KH.C11.580 KH2012:KH.C11.432 KH2012:KH.C11.612 KH2012:KH.C11.681 KH2012:KH.C11.81 KH2012:KH.C11.221 KH2012:KH.C11.635 KH2012:KH.C11.258 KH2012:KH.C11.283 KH2012:KH.C11.462 KH2012:KH.C11.13 KH2012:KH.C11.593 KH2012:KH.C11.267 KH2012:KH.C11.90 KH2012:KH.C11.282 KH2012:KH.C11.692 KH2012:KH.C11.131 KH2012:KH.C11.3 KH2012:KH.C11.214 KH2012:KH.C11.535 KH2012:KH.C11.155 KH2012:KH.C11.413 KH2012:KH.C11.645 KH2012:KH.C11.537 KH2012:KH.C11.705 KH2012:KH.C11.78 KH2012:KH.C11.313 KH2012:KH.C11.644 KH2012:KH.C11.501 Click to hide this line (15_Phlebobranchia) 15_Phlebobranchia speciation node (click to collapse) 15_Phlebobranchia (~10 My ago) - block_1060 Fam007897 Click to hide this line (11_Ciona) 11_Ciona speciation node (click to collapse) 11_Ciona (~10 My ago) Click to hide this line (Cirobu) Cirobu terminal node Cirobu - Chr:KhC11 KH2012:KH.C11.668 KH2012:KH.C11.475 KH2012:KH.C11.444 KH2012:KH.C11.312 KH2012:KH.C11.148 KH2012:KH.C11.172 KH2012:KH.C11.68 KH2012:KH.C11.307 KH2012:KH.C11.552 KH2012:KH.C11.359 KH2012:KH.C11.630 KH2012:KH.C11.547 KH2012:KH.C11.694 KH2012:KH.C11.317 KH2012:KH.C11.276 KH2012:KH.C11.353 KH2012:KH.C11.366 KH2012:KH.C11.393 KH2012:KH.C11.14 KH2012:KH.C11.19 KH2012:KH.C11.679 KH2012:KH.C11.670 KH2012:KH.C11.193 KH2012:KH.C11.73 KH2012:KH.C11.194 KH2012:KH.C11.437 KH2012:KH.C11.242 KH2012:KH.C11.622 KH2012:KH.C11.676 KH2012:KH.C11.129 Click to hide this line (Cisavi) Cisavi terminal node Cisavi - Chr:reftig_16 Cisavi.CG.ENS81.R16.3406135-3408877 (ENSCSAVG00000011290) Cisavi.CG.ENS81.R16.3411166-3411876 (ENSCSAVG00000011291) Cisavi.CG.ENS81.R16.3415962-3446364 (ENSCSAVG00000011292) Cisavi.CG.ENS81.R16.3467587-3468916 (ENSCSAVG00000011300) Cisavi.CG.ENS81.R16.3472316-3474679 (ENSCSAVG00000011301) Cisavi.CG.ENS81.R16.3475066-3480835 (ENSCSAVG00000011303) Cisavi.CG.ENS81.R16.3485068-3485957 (ENSCSAVG00000011306) Cisavi.CG.ENS81.R16.3492584-3500468 (ENSCSAVG00000011307) Cisavi.CG.ENS81.R16.3511299-3519814 (ENSCSAVG00000011316) Cisavi.CG.ENS81.R16.3539744-3540934 (ENSCSAVG00000011319) Cisavi.CG.ENS81.R16.3547257-3548449 (ENSCSAVG00000011320) Cisavi.CG.ENS81.R16.3549584-3553708 (ENSCSAVG00000011321) Cisavi.CG.ENS81.R16.3556756-3561029 (ENSCSAVG00000011322) Cisavi.CG.ENS81.R16.3565545-3570037 (ENSCSAVG00000011323) Cisavi.CG.ENS81.R16.3573229-3579521 (ENSCSAVG00000011324) Cisavi.CG.ENS81.R16.3601171-3607509 (ENSCSAVG00000011329) Cisavi.CG.ENS81.R16.3609547-3610292 (ENSCSAVG00000011333) Cisavi.CG.ENS81.R16.3637470-3646586 (ENSCSAVG00000011335) Cisavi.CG.ENS81.R16.3647651-3657400 (ENSCSAVG00000011363) Cisavi.CG.ENS81.R16.3685125-3693675 (ENSCSAVG00000011412) Cisavi.CG.ENS81.R16.3707293-3713531 (ENSCSAVG00000011413) Cisavi.CG.ENS81.R16.3713663-3721185 (ENSCSAVG00000011414) Cisavi.CG.ENS81.R16.3722801-3727117 (ENSCSAVG00000011415) Cisavi.CG.ENS81.R16.3727941-3732720 (ENSCSAVG00000011416) Cisavi.CG.ENS81.R16.3735006-3737547 (ENSCSAVG00000011417) Cisavi.CG.ENS81.R16.3739192-3740610 (ENSCSAVG00000011418) Cisavi.CG.ENS81.R16.3742168-3742975 (ENSCSAVG00000011419) Cisavi.CG.ENS81.R16.3746084-3779207 (ENSCSAVG00000011420) Cisavi.CG.ENS81.R16.3767534-3787491 (ENSCSAVG00000011421) Cisavi.CG.ENS81.R16.3789519-3792109 (ENSCSAVG00000011422) Click to show this node (14_Phallusia) 14_Phallusia speciation node (click to collapse) Click to hide this line (Phmamm) Phmamm terminal node Phmamm - Chr:S212 Phmamm.CG.MTP2014.S212.g05467 Phmamm.CG.MTP2014.S212.g05468 Phmamm.CG.MTP2014.S212.g05469 Phmamm.CG.MTP2014.S212.g05470 Phmamm.CG.MTP2014.S212.g05471 Phmamm.CG.MTP2014.S212.g05472 Phmamm.CG.MTP2014.S212.g05473 Phmamm.CG.MTP2014.S212.g05474 Phmamm.CG.MTP2014.S212.g05475 Phmamm.CG.MTP2014.S212.g05476 Phmamm.CG.MTP2014.S212.g05477 Phmamm.CG.MTP2014.S212.g05478 Phmamm.CG.MTP2014.S212.g05479 Phmamm.CG.MTP2014.S212.g05480 Phmamm.CG.MTP2014.S212.g05481 Phmamm.CG.MTP2014.S212.g05483 Click to show this node (8_Stolidobranchia) 8_Stolidobranchia duplication node (click to collapse) Click to hide this line (8_Stolidobranchia) 8_Stolidobranchia speciation node (click to collapse) 8_Stolidobranchia (~10 My ago) - block_184 Fam007897 Click to hide this line (2_Molgula) 2_Molgula speciation node (click to collapse) 2_Molgula (~10 My ago) - block_802 Fam007897 Click to hide this line (Moocci) Moocci terminal node Moocci - Chr:S384929 Moocci.CG.ELv1_2.S384929.g11082 Click to hide this line (Moocul) Moocul terminal node Moocul - Chr:S113940 Moocul.CG.ELv1_2.S113940.g13231 Moocul.CG.ELv1_2.S113940.g13232 Click to show this node (7) 7 speciation node (click to collapse) Click to show this node (6_Halocynthia) 6_Halocynthia speciation node (click to collapse) Click to hide this line (Harore) Harore terminal node Harore - Chr:S7 Harore.CG.MTP2014.S7.g03006 Harore.CG.MTP2014.S7.g02684 Harore.CG.MTP2014.S7.g07933 Harore.CG.MTP2014.S7.g11081 Harore.CG.MTP2014.S7.g01280 Harore.CG.MTP2014.S7.g03663 Harore.CG.MTP2014.S7.g14937 Harore.CG.MTP2014.S7.g04976 Harore.CG.MTP2014.S7.g13726 Harore.CG.MTP2014.S7.g00689 Harore.CG.MTP2014.S7.g05985 Harore.CG.MTP2014.S7.g07433 Harore.CG.MTP2014.S7.g13058 Harore.CG.MTP2014.S7.g15524 Harore.CG.MTP2014.S7.g06548 Harore.CG.MTP2014.S7.g03493 Harore.CG.MTP2014.S7.g04766 Harore.CG.MTP2014.S7.g02356 Harore.CG.MTP2014.S7.g12993 Harore.CG.MTP2014.S7.g12857 Harore.CG.MTP2014.S7.g14025 Harore.CG.MTP2014.S7.g07022 Harore.CG.MTP2014.S7.g02301 Harore.CG.MTP2014.S7.g00227 Harore.CG.MTP2014.S7.g11838 Harore.CG.MTP2014.S7.g04479 Harore.CG.MTP2014.S7.g06630 Harore.CG.MTP2014.S7.g01545 Harore.CG.MTP2014.S7.g03134 Harore.CG.MTP2014.S7.g02515 Click to show this node (8_Stolidobranchia) 8_Stolidobranchia speciation node (click to collapse) Click to show this node (7) 7 speciation node (click to collapse) Click to show this node (Boschl) Boschl duplication node (click to collapse) Click to hide this line (Boschl) Boschl terminal node Boschl - Chr:chrUn Boschl.CG.Botznik2013.chrUn.g65313 Boschl.CG.Botznik2013.chrUn.g65315 Boschl.CG.Botznik2013.chrUn.g65316 Boschl.CG.Botznik2013.chrUn.g65326 Boschl.CG.Botznik2013.chrUn.g65330 Boschl.CG.Botznik2013.chrUn.g65332 Boschl.CG.Botznik2013.chrUn.g65333 Boschl.CG.Botznik2013.chrUn.g65334 Boschl.CG.Botznik2013.chrUn.g65336 Boschl.CG.Botznik2013.chrUn.g65337 Boschl.CG.Botznik2013.chrUn.g65338 Boschl.CG.Botznik2013.chrUn.g65340 Boschl.CG.Botznik2013.chrUn.g65345 Boschl.CG.Botznik2013.chrUn.g65346 Boschl.CG.Botznik2013.chrUn.g65351 Boschl.CG.Botznik2013.chrUn.g65354 Boschl.CG.Botznik2013.chrUn.g65355 Boschl.CG.Botznik2013.chrUn.g65356 Boschl.CG.Botznik2013.chrUn.g65360 Boschl.CG.Botznik2013.chrUn.g65363 Boschl.CG.Botznik2013.chrUn.g65372 Boschl.CG.Botznik2013.chrUn.g65373 Boschl.CG.Botznik2013.chrUn.g65374 Boschl.CG.Botznik2013.chrUn.g65376 Boschl.CG.Botznik2013.chrUn.g65377 Boschl.CG.Botznik2013.chrUn.g65379 Boschl.CG.Botznik2013.chrUn.g65382 Boschl.CG.Botznik2013.chrUn.g65384 Boschl.CG.Botznik2013.chrUn.g65385 Boschl.CG.Botznik2013.chrUn.g65386 Click to hide this line (Boschl) Boschl terminal node Boschl - Chr:chrUn Boschl.CG.Botznik2013.chrUn.g31184 Boschl.CG.Botznik2013.chrUn.g31186 Boschl.CG.Botznik2013.chrUn.g31188 Boschl.CG.Botznik2013.chrUn.g31189 Boschl.CG.Botznik2013.chrUn.g31190 Boschl.CG.Botznik2013.chrUn.g31191 Boschl.CG.Botznik2013.chrUn.g31192 Boschl.CG.Botznik2013.chrUn.g31193 Boschl.CG.Botznik2013.chrUn.g31194 Boschl.CG.Botznik2013.chrUn.g31196 Boschl.CG.Botznik2013.chrUn.g31199 Boschl.CG.Botznik2013.chrUn.g31200 Boschl.CG.Botznik2013.chrUn.g31206 Boschl.CG.Botznik2013.chrUn.g31210 Boschl.CG.Botznik2013.chrUn.g31211 Boschl.CG.Botznik2013.chrUn.g31213 Boschl.CG.Botznik2013.chrUn.g31214 Boschl.CG.Botznik2013.chrUn.g31218 Boschl.CG.Botznik2013.chrUn.g31219 Boschl.CG.Botznik2013.chrUn.g31226 Boschl.CG.Botznik2013.chrUn.g31228 Boschl.CG.Botznik2013.chrUn.g31229 Boschl.CG.Botznik2013.chrUn.g31240 Boschl.CG.Botznik2013.chrUn.g31246 Boschl.CG.Botznik2013.chrUn.g31248 Boschl.CG.Botznik2013.chrUn.g31249 Boschl.CG.Botznik2013.chrUn.g31251 Boschl.CG.Botznik2013.chrUn.g31252 Boschl.CG.Botznik2013.chrUn.g31255 Boschl.CG.Botznik2013.chrUn.g31259 Click to hide this line (30_Chordata) 30_Chordata speciation node (click to collapse) 30_Chordata (~10 My ago) Click to show this node (28) 28 speciation node (click to collapse) Click to hide this line (26_Sarcopterygii) 26_Sarcopterygii speciation node (click to collapse) 26_Sarcopterygii (~10 My ago) - block_201 Fam001967.G Fam002816.B Fam002468.H Fam003609 Click to hide this line (Lcha) Lcha terminal node Lcha - Chr:JH126660.1 ENSLACG00000008389 ENSLACG00000022199 ENSLACG00000009219 ENSLACG00000009483 ENSLACG00000009799 ENSLACG00000010950 ENSLACG00000011171 ENSLACG00000016665 ENSLACG00000016800 ENSLACG00000016992 ENSLACG00000017093 ENSLACG00000017110 ENSLACG00000017632 ENSLACG00000017663 ENSLACG00000017777 ENSLACG00000017797 ENSLACG00000017811 ENSLACG00000017874 Click to hide this line (25_Amniota) 25_Amniota speciation node (click to collapse) 25_Amniota (~10 My ago) - block_245 Fam003609 Fam003507.A.a Fam002468.H Fam002816.B Fam001967.G Fam001717.S.a Fam002336.DH Click to hide this line (24_Euarchontoglires) 24_Euarchontoglires speciation node (click to collapse) 24_Euarchontoglires (~10 My ago) - block_4 Fam006974.b.b Fam006766.b Fam002336.VC.d Fam002135.B.b.a.b Fam001880.B.a.a.a Fam005750.b.b Fam002133.E.b Fam002457.S.a.a.a.a Fam001232.c Fam006978.a.a Fam002323.D Fam002336.DH Fam001717.S.a.b Fam001717.S.a.a Fam001967.G Fam002816.B Fam002468.H Fam003507.A.a Fam003609 Fam009079.b.b Fam004182.a Fam002176.L.b.b Fam001871.A Fam002344.T.a.b Fam002344.T.a.a Fam001795.CB Fam003230.a Fam006743.a.b.b Fam001940.E Fam002540.S.b.b Click to hide this line (Mmus) Mmus terminal node Mmus - Chr:12 ENSMUSG00000021056 ENSMUSG00000021048 ENSMUSG00000021057 ENSMUSG00000056459 ENSMUSG00000033454 ENSMUSG00000059970 ENSMUSG00000052221 ENSMUSG00000073000 ENSMUSG00000052609 ENSMUSG00000021061 ENSMUSG00000090258 ENSMUSG00000042808 ENSMUSG00000021062 ENSMUSG00000033373 ENSMUSG00000059436 ENSMUSG00000099418 ENSMUSG00000047454 ENSMUSG00000056987 ENSMUSG00000021112 ENSMUSG00000021114 ENSMUSG00000021116 ENSMUSG00000021118 ENSMUSG00000046157 ENSMUSG00000060716 ENSMUSG00000021120 ENSMUSG00000021125 ENSMUSG00000021124 ENSMUSG00000066441 ENSMUSG00000021123 ENSMUSG00000066440 Click to hide this line (Hsap) Hsap terminal node Hsap - Chr:14 ENSG00000100714 ENSG00000179841 ENSG00000089775 ENSG00000126804 ENSG00000126803 ENSG00000165807 ENSG00000126822 ENSG00000070182 ENSG00000279654 ENSG00000258289 ENSG00000125954 ENSG00000176153 ENSG00000139998 ENSG00000257365 ENSG00000125952 ENSG00000196553 ENSG00000171723 ENSG00000172717 ENSG00000072415 ENSG00000100554 ENSG00000134001 ENSG00000100558 ENSG00000198133 ENSG00000054690 ENSG00000100564 ENSG00000081181 ENSG00000100568 ENSG00000258466 ENSG00000072042 ENSG00000139988 Click to hide this line (21_Archelosauria) 21_Archelosauria speciation node (click to collapse) 21_Archelosauria (~10 My ago) - block_200 Fam002816.B Fam002468.H Fam003507.A.a Fam003609 Fam002344.T.a Fam001871.A Fam002176.L.b.b Fam004182.a Fam009079.b.b Click to hide this line (Psin) Psin terminal node Psin - Chr:JH206102.1 ENSPSIG00000007363 ENSPSIG00000007575 ENSPSIG00000008943 ENSPSIG00000010721 ENSPSIG00000011126 ENSPSIG00000012451 ENSPSIG00000012797 ENSPSIG00000000040 ENSPSIG00000014235 ENSPSIG00000014754 ENSPSIG00000014967 ENSPSIG00000016586 ENSPSIG00000016624 ENSPSIG00000000041 ENSPSIG00000000042 ENSPSIG00000003833 ENSPSIG00000003853 ENSPSIG00000003860 ENSPSIG00000003906 ENSPSIG00000003911 ENSPSIG00000003922 ENSPSIG00000004089 ENSPSIG00000004129 ENSPSIG00000004194 ENSPSIG00000004231 ENSPSIG00000004344 ENSPSIG00000004361 Click to hide this line (Ggal) Ggal terminal node Ggal Click to hide this line (Bbel) Bbel terminal node Bbel - scaffold60 242900F 242910F 242920F 242930F 242940F 242950F 242960F 242970F 242980R 242990F 243000R 243010R 243020F 243030R 243040F 243060F 243070F 243080R 243090F 243100R 243110F 243120R 243130R 243140F 243150R 243160F 243170R 243180F Click to hide this line (33) 33 speciation node (click to collapse) 33 (~10 My ago) Click to show this node (Skow) Skow duplication node (click to collapse) Click to hide this line (Skow) Skow terminal node Skow - scaffold_41 Sakowv30027983m.g Sakowv30027936m.g Sakowv30027929m.g Sakowv30027908m.g Sakowv30027887m.g Sakowv30027922m.g Sakowv30028003m.g Sakowv30027930m.g Sakowv30027980m.g Sakowv30027920m.g Sakowv30027924m.g Sakowv30027944m.g Sakowv30028027m.g Sakowv30027937m.g Sakowv30028023m.g Sakowv30027986m.g Sakowv30028046m.g Sakowv30028037m.g Sakowv30028045m.g Sakowv30027883m.g Sakowv30027884m.g Sakowv30027885m.g Sakowv30028024m.g Sakowv30027991m.g Sakowv30028040m.g Sakowv30028041m.g Sakowv30027921m.g Sakowv30027895m.g Sakowv30028047m.g Sakowv30027925m.g Click to hide this line (Skow) Skow terminal node Skow - scaffold_59 Sakowv30037798m.g Sakowv30037864m.g Sakowv30037801m.g Sakowv30037809m.g Sakowv30037816m.g Sakowv30037799m.g Sakowv30037807m.g Sakowv30037785m.g Sakowv30037871m.g Sakowv30037797m.g Sakowv30037858m.g Sakowv30037819m.g Sakowv30037790m.g Sakowv30037881m.g Sakowv30037865m.g Sakowv30037869m.g Sakowv30037893m.g Sakowv30037870m.g Sakowv30037894m.g Sakowv30037803m.g Sakowv30037842m.g Sakowv30037836m.g Sakowv30037844m.g Sakowv30037891m.g Sakowv30037837m.g Sakowv30037839m.g Sakowv30037835m.g Sakowv30037846m.g Sakowv30037838m.g Sakowv30037862m.g Click to show this node (Spur) Spur duplication node (click to collapse) Click to show this node (Spur) Spur duplication node (click to collapse) Click to hide this line (Spur) Spur terminal node Spur - Chr:Scaffold256 SPU_018932 SPU_018931 SPU_018930 SPU_002587 SPU_018934 SPU_018935 SPU_018929 SPU_026475 SPU_017275 SPU_017695 SPU_017694 SPU_027964 SPU_027963 SPU_027965 SPU_026472 SPU_026471 SPU_026470 SPU_000725 SPU_019774 Click to hide this line (Spur) Spur terminal node Spur - Chr:Scaffold256 SPU_015782 SPU_018932 SPU_018931 SPU_018930 SPU_002587 SPU_018934 SPU_018935 SPU_018929 SPU_026475 SPU_017275 SPU_017695 SPU_017694 SPU_027964 SPU_027963 SPU_027965 SPU_026472 SPU_026471 SPU_026470 SPU_000725 SPU_019774 Click to show this node (Spur) Spur duplication node (click to collapse) Click to show this node (Spur) Spur duplication node (click to collapse) Click to show this node (Spur) Spur duplication node (click to collapse) Click to hide this line (Spur) Spur terminal node Spur - Chr:Scaffold3281 SPU_013878 SPU_013877 Click to hide this line (Spur) Spur terminal node Spur - Chr:Scaffold2520 SPU_000179 Click to show this node (Spur) Spur duplication node (click to collapse) Click to show this node (Spur) Spur duplication node (click to collapse) Click to hide this line (Spur) Spur terminal node Spur - Chr:Scaffold1795 SPU_022108 SPU_021840 SPU_017681 SPU_006263 SPU_017683 SPU_017682 Click to hide this line (Spur) Spur terminal node Spur - Chr:Scaffold2520 SPU_000179 Click to hide this line (Spur) Spur terminal node Spur - Chr:Scaffold2530 SPU_026505 Click to hide this line (Spur) Spur terminal node Spur - Chr:Scaffold119 SPU_007545 SPU_001437 SPU_023458 SPU_026059 SPU_026760 SPU_017048 SPU_016603 SPU_015666 SPU_015670 SPU_015667 SPU_015669 SPU_020838 SPU_020837 SPU_014767 SPU_015668 SPU_026906 Cisavi.CG.ENS81.R72.1499770-1500298 (ENSCSAVG00000005887) Cisavi.CG.ENS81.R72.1499770-1500298 (ENSCSAVG00000005887) Cisavi.CG.ENS81.R72.1075209-1078520 (ENSCSAVG00000005304) Cisavi.CG.ENS81.R72.1075209-1078520 (ENSCSAVG00000005304) Fam006456 Fam006456.a Fam006456.a.a.a.a.b.a Fam006456.a.a.a.a.b.a.a.a Cisavi.CG.ENS81.R72.1095865-1099287 (ENSCSAVG00000005323) Cisavi.CG.ENS81.R72.1095865-1099287 (ENSCSAVG00000005323) KH2012:KH.C9.252 Phmamm.CG.MTP2014.S167.g04611 Fam006456.a.c Fam006456.a.c Moocci.CG.ELv1_2.S384929.g11081 Moocul.CG.ELv1_2.S113940.g13233 Harore.CG.MTP2014.S7.g03106 Boschl.CG.Botznik2013.chrUn.g65352 Boschl.CG.Botznik2013.chrUn.g31212 Fam006456 Sakowv30028042m.g Sakowv30037810m.g SPU_013217 SPU_027962 SPU_013217 SPU_027962 SPU_025350 SPU_025349 SPU_023637 SPU_013879 SPU_025349 SPU_023637 SPU_010462 SPU_010392 Cisavi.CG.ENS81.R132.799704-806605 (ENSCSAVG00000004860) Cisavi.CG.ENS81.R132.854844-857358 (ENSCSAVG00000004883) Cisavi.CG.ENS81.R132.799704-806605 (ENSCSAVG00000004860) Cisavi.CG.ENS81.R132.854844-857358 (ENSCSAVG00000004883) Cisavi.CG.ENS81.R24.1078945-1083170 (ENSCSAVG00000008456) KH2012:KH.C2.978 Cisavi.CG.ENS81.R156.494227-497832 (ENSCSAVG00000009340) Fam006456.a.a.a.a.b.a.a.b.b.b.a.b Cisavi.CG.ENS81.R91.1234255-1237270 (ENSCSAVG00000001235) Cisavi.CG.ENS81.R509.116698-120221 (ENSCSAVG00000003168) Cisavi.CG.ENS81.R65.175851-180239 (ENSCSAVG00000004517) KH2012:KH.C3.581 KH2012:KH.S562.5 Cisavi.CG.ENS81.R54.926162-929862 (ENSCSAVG00000007213) KH2012:KH.C5.326 KH2012:KH.C5.580 KH2012:KH.C5.326 KH2012:KH.C5.580 KH2012:KH.C11.299 Cisavi.CG.ENS81.R151.161220-163751 (ENSCSAVG00000002475) KH2012:KH.L96.83 KH2012:KH.C2.436 KH2012:KH.C11.158 Fam006456.a.b Fam006456.a.b KH2012:KH.C11.232 Cisavi.CG.ENS81.R16.3586301-3596386 (ENSCSAVG00000011325) Phmamm.CG.MTP2014.S212.g05482 Fam006456.b Fam006456.b ENSLACG00000014928 Fam006456.b Fam006456.b ENSMUSG00000021065 ENSG00000033170 Fam006456.b ENSPSIG00000003737 ENSGALP00000037734 243050R Cisavi.CG.ENS81.R72.1522691-1527404 (ENSCSAVG00000005966) Cisavi.CG.ENS81.R72.1528017-1548980 (ENSCSAVG00000006096) Cisavi.CG.ENS81.R72.1503405-1505900 (ENSCSAVG00000005889) Cisavi.CG.ENS81.R72.1503405-1505900 (ENSCSAVG00000005889) Cisavi.CG.ENS81.R72.1358709-1363454 (ENSCSAVG00000005589) Cisavi.CG.ENS81.R72.1358709-1363454 (ENSCSAVG00000005589) Cisavi.CG.ENS81.R72.758728-765542 (ENSCSAVG00000004913) Cisavi.CG.ENS81.R72.758728-765542 (ENSCSAVG00000004913) Cisavi.CG.ENS81.R72.1344789-1355851 (ENSCSAVG00000005587) Cisavi.CG.ENS81.R72.1344789-1355851 (ENSCSAVG00000005587) Cisavi.CG.ENS81.R72.836718-838655 (ENSCSAVG00000005123) Cisavi.CG.ENS81.R72.836718-838655 (ENSCSAVG00000005123) Cisavi.CG.ENS81.R72.1244130-1258109 (ENSCSAVG00000005497) Cisavi.CG.ENS81.R72.1244130-1258109 (ENSCSAVG00000005497) Cisavi.CG.ENS81.R72.741035-744473 (ENSCSAVG00000004906) Cisavi.CG.ENS81.R72.741035-744473 (ENSCSAVG00000004906) Cisavi.CG.ENS81.R72.1515906-1520259 (ENSCSAVG00000005891) Cisavi.CG.ENS81.R72.1458238-1462443 (ENSCSAVG00000005617) Cisavi.CG.ENS81.R72.1458238-1462443 (ENSCSAVG00000005617) Cisavi.CG.ENS81.R72.1483919-1488636 (ENSCSAVG00000005856) Cisavi.CG.ENS81.R72.1483919-1488636 (ENSCSAVG00000005856) Cisavi.CG.ENS81.R72.781654-782967 (ENSCSAVG00000004919) Cisavi.CG.ENS81.R72.781654-782967 (ENSCSAVG00000004919) Cisavi.CG.ENS81.R72.1416395-1450757 (ENSCSAVG00000005593) Cisavi.CG.ENS81.R72.1416395-1450757 (ENSCSAVG00000005593) Cisavi.CG.ENS81.R72.712378-724088 (ENSCSAVG00000004874) Cisavi.CG.ENS81.R72.712378-724088 (ENSCSAVG00000004874) Cisavi.CG.ENS81.R72.1168116-1173085 (ENSCSAVG00000005328) Cisavi.CG.ENS81.R72.1168116-1173085 (ENSCSAVG00000005328) Cisavi.CG.ENS81.R72.748848-754701 (ENSCSAVG00000004909) Cisavi.CG.ENS81.R72.748848-754701 (ENSCSAVG00000004909) Cisavi.CG.ENS81.R72.726763-728400 (ENSCSAVG00000004895) Cisavi.CG.ENS81.R72.726763-728400 (ENSCSAVG00000004895) Cisavi.CG.ENS81.R72.1175150-1221020 (ENSCSAVG00000005351) Cisavi.CG.ENS81.R72.1175150-1221020 (ENSCSAVG00000005351) Cisavi.CG.ENS81.R72.731619-736780 (ENSCSAVG00000004900) Cisavi.CG.ENS81.R72.731619-736780 (ENSCSAVG00000004900) Cisavi.CG.ENS81.R72.1276586-1281634 (ENSCSAVG00000005583) Cisavi.CG.ENS81.R72.1276586-1281634 (ENSCSAVG00000005583) Cisavi.CG.ENS81.R72.895024-921768 (ENSCSAVG00000005132) Cisavi.CG.ENS81.R72.895024-921768 (ENSCSAVG00000005132) Cisavi.CG.ENS81.R72.1039394-1040404 (ENSCSAVG00000005302) Cisavi.CG.ENS81.R72.1039394-1040404 (ENSCSAVG00000005302) Cisavi.CG.ENS81.R72.1471394-1476539 (ENSCSAVG00000005755) Cisavi.CG.ENS81.R72.1471394-1476539 (ENSCSAVG00000005755) KH2012:KH.L96.108 Cisavi.CG.ENS81.R72.796856-807684 (ENSCSAVG00000004920) Cisavi.CG.ENS81.R72.796856-807684 (ENSCSAVG00000004920) Cisavi.CG.ENS81.R72.1013985-1018233 (ENSCSAVG00000005296) Cisavi.CG.ENS81.R72.1013985-1018233 (ENSCSAVG00000005296) Cisavi.CG.ENS81.R72.1081199-1083200 (ENSCSAVG00000005315) Cisavi.CG.ENS81.R72.1081199-1083200 (ENSCSAVG00000005315) Cisavi.CG.ENS81.R72.932676-952092 (ENSCSAVG00000005209) Cisavi.CG.ENS81.R72.932676-952092 (ENSCSAVG00000005209)